RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 KCNT2Q6UVM3 1135 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 C4orf50Q6ZRC1 276 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 B4GALNT4Q76KP1 1039 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 LRRTM3Q86VH5 581 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 PYROXD1Q8WU10 500 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 XPO6Q96QU8 1125 aaKnown RBP12.2□□□□□ -0.46
SMAD3-202ENST00000439724 WDR83Q9BRX9 315 aaKnown RBP12.2□□□□□ -0.46
SMAD3-202ENST00000439724 KLC2Q9H0B6 622 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMAD3-202ENST00000439724 VPS37BQ9H9H4 285 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 TBC1D13Q9NVG8 400 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 TMEM161AQ9NX61 479 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 CTNNAL1Q9UBT7 734 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 PRDM4Q9UKN5 801 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 ACTL7BQ9Y614 415 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 CLUHO75153 1309 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 ZNF638Q14966 1978 aaKnown RBP12.19□□□□□ -0.46
SMAD3-202ENST00000439724 GMNCA6NCL1 334 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 C5orf60A6NFR6 353 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 F8W810 466 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 NDUFAB1O14561 156 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 MFSD11O43934 449 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 ZNF189O75820 626 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-202ENST00000439724 FAM107AO95990 144 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 NCAM1P13591 858 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 GCAP28676 217 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 HCAR3P49019 387 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 GPX6P59796 221 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 BFSP2Q13515 415 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 PAFAH1B3Q15102 231 aaKnown RBP12.19□□□□□ -0.46
SMAD3-202ENST00000439724 CCDC38Q502W7 563 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 FOXR1Q6PIV2 292 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 TADA2BQ86TJ2 420 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 NLRP14Q86W24 1093 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 ZNF280BQ86YH2 543 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 FAM126BQ8IXS8 530 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 TAB3Q8N5C8 712 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-202ENST00000439724 MDM1Q8TC05 714 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 ZNF296Q8WUU4 475 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-202ENST00000439724 ATXN2LQ8WWM7 1075 aaKnown RBP12.19□□□□□ -0.46
SMAD3-202ENST00000439724 TMEM209Q96SK2 561 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 RAB6BQ9NRW1 208 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 ETNK2Q9NVF9 386 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 SAGE1Q9NXZ1 904 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 SLC24A2Q9UI40 661 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 FBXW11Q9UKB1 542 aa12.19□□□□□ -0.46
SMAD3-202ENST00000439724 SYNJ2BP-COX16A0A087WUM0 186 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 EEF2KO00418 725 aaKnown RBP12.18□□□□□ -0.46
SMAD3-202ENST00000439724 DNM1LO00429 736 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 DCLK1O15075 740 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 BANF1O75531 89 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 OAZ2O95190 189 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 MAP3K6O95382 1288 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 TPSB2P20231 275 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 CXCR3P49682 368 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 PRKD1Q15139 912 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-202ENST00000439724 TPSAB1Q15661 275 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 ARL13BQ3SXY8 428 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 BBS9Q3SYG4 887 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 HP1BP3Q5SSJ5 553 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-202ENST00000439724 HEATR6Q6AI08 1181 aaKnown RBP12.18□□□□□ -0.46
SMAD3-202ENST00000439724 VSTM1Q6UX27 236 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 RFX8Q6ZV50 586 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 SPATA2LQ8IUW3 424 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-202ENST00000439724 ANKMY2Q8IV38 441 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 CYP4X1Q8N118 509 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 MCUQ8NE86 351 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 FBXO36Q8NEA4 188 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 TFB1MQ8WVM0 346 aaKnown RBP12.18□□□□□ -0.46
SMAD3-202ENST00000439724 MAML1Q92585 1016 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 CCDC134Q9H6E4 229 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 ACSS3Q9H6R3 686 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 TMPRSS4Q9NRS4 437 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 DDIT4Q9NX09 232 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 COX16Q9P0S2 106 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 MFHAS1Q9Y4C4 1052 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 RAD54BQ9Y620 910 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 TANC1Q9C0D5 1861 aa12.18□□□□□ -0.46
SMAD3-202ENST00000439724 A0A0A0MRY4 1105 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 SYN3O14994 580 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 NBNO60934 754 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 SPAG6O75602 509 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 VAV1P15498 845 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 ATP2A2P16615 1042 aaKnown RBP12.17□□□□□ -0.46
SMAD3-202ENST00000439724 CCT5P48643 541 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 GLUD2P49448 558 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 SEC24CP53992 1094 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 PDK1Q15118 436 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 KLHL38Q2WGJ6 581 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 PLEKHG4Q58EX7 1191 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 BSPRYQ5W0U4 402 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 CTU1Q7Z7A3 348 aaKnown RBP12.17□□□□□ -0.46
SMAD3-202ENST00000439724 VPS52Q8N1B4 723 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 CCDC110Q8TBZ0 833 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 ZNF473Q8WTR7 871 aaKnown RBP12.17□□□□□ -0.46
SMAD3-202ENST00000439724 HTR3CQ8WXA8 447 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 SPATA13Q96N96 652 aa12.17□□□□□ -0.46
SMAD3-202ENST00000439724 FAM193BQ96PV7 902 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-202ENST00000439724 CCT8L2Q96SF2 557 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms