RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 C3orf58Q8NDZ4 430 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 GRK7Q8WTQ7 553 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 LINC01599Q8WXQ3 324 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 IRGQQ8WZA9 623 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 KRT35Q92764 455 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PLD4Q96BZ4 506 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 SCARF2Q96GP6 870 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PAWRQ96IZ0 340 aaKnown RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 TBCBQ99426 244 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 KRT12Q99456 494 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 LPIN3Q9BQK8 851 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 RHOXF2Q9BQY4 288 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 B3GNT5Q9BYG0 378 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 FRMD8P1Q9BZ68 369 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 RAB17Q9H0T7 212 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 ANKZF1Q9H8Y5 726 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PRDM16Q9HAZ2 1276 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 LRRC4Q9HBW1 653 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 ARFGAP3Q9NP61 516 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 CRTAC1Q9NQ79 661 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PRDM6Q9NQX0 595 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 METTL5Q9NRN9 209 aaKnown RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 KRT82Q9NSB4 513 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 RBM12Q9NTZ6 932 aaKnown RBP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 RRN3Q9NYV6 651 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 STK39Q9UEW8 545 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PCYOX1Q9UHG3 505 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 RASAL2Q9UJF2 1139 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 ADAM28Q9UKQ2 775 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 TBX21Q9UL17 535 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 MKL2Q9ULH7 1088 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 TRIM33Q9UPN9 1127 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 ATP11BQ9Y2G3 1177 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAN1Q9Y2M0 1017 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 TSC2P49815 1807 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 SF3B1O75533 1304 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 PTPRDP23468 1912 aa4.15□□□□□ -1.75
HMGB1P37-201ENST00000439613 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 A0A1W2PP55 124 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM170AA1A519 330 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 MYBPHLA2RUH7 354 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 TBKBP1A7MCY6 615 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF487B1APH4 448 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 I3L4J1 428 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 PIK3R2O00459 728 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 NDC80O14777 642 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 PAPSS1O43252 624 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 PHF2O75151 1096 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 LRCH4O75427 683 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 DAB1O75553 588 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF189O75820 626 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 BAIAP3O94812 1187 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 DDHD2O94830 711 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 TRUB2O95900 331 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 GAS8O95995 478 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZBED1O96006 694 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 KRT1P04264 644 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 LCP1P13796 627 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 EDN3P14138 238 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 RAG1P15918 1043 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 ACAT1P24752 427 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 RDXP35241 583 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 MATKP42679 507 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 MAGEA11P43364 429 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 BRCC3P46736 316 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 MARCKSL1P49006 195 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 FNTAP49354 379 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 ALDH7A1P49419 539 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 DGKGP49619 791 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 TKTL1P51854 596 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 LBX1P52954 281 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 AIF1P55008 147 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 DRG2P55039 364 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCL23P55773 120 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 TAS2R40P59535 323 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 RNASE9P60153 205 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 YWHAZP63104 245 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 MRPS5P82675 430 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 DR1Q01658 176 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 OGDHQ02218 1023 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF252P-AS1Q0IIN9 211 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 TFDP2Q14188 446 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 SMC1AQ14683 1233 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCNG2Q16589 344 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 CYP1B1Q16678 543 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 TFDP3Q5H9I0 405 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZFYVE27Q5T4F4 411 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM171A1Q5VUB5 890 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF280DQ6N043 979 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 MFSD5Q6N075 450 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 LLGL2Q6P1M3 1020 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 EMBQ6PCB8 327 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 FBXO38Q6PIJ6 1188 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 OLFML1Q6UWY5 402 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 VSTM1Q6UX27 236 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 CD300LGQ6UXG3 332 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCNI2Q6ZMN8 369 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 SPOCD1Q6ZMY3 1216 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 CLEC20AQ6ZU45 233 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms