RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 TSPAN16Q9UKR8 245 aa12.03□□□□□ -0.48
IRF1-204ENST00000439555 STRIP2Q9ULQ0 834 aa12.03□□□□□ -0.48
IRF1-204ENST00000439555 GON4LQ3T8J9 2241 aa12.02□□□□□ -0.48
IRF1-204ENST00000439555 HELZP42694 1942 aaKnown RBP12.02□□□□□ -0.49
IRF1-204ENST00000439555 IGSF10Q6WRI0 2623 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 PPP1R3GB7ZBB8 358 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 NEDD8-MDP1E9PL57 170 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 O00370 1275 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 NPC1O15118 1278 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 PENKP01210 267 aaPredicted RBP12.02□□□□□ -0.49
IRF1-204ENST00000439555 KLKB1P03952 638 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 CISD3P0C7P0 127 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
IRF1-204ENST00000439555 BMP6P22004 513 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 NTSR1P30989 418 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 GBP1P32455 592 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 ZNF132P52740 706 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 MARSP56192 900 aaKnown RBP12.02□□□□□ -0.49
IRF1-204ENST00000439555 YWHAGP61981 247 aaKnown RBP eCLIP12.02□□□□□ -0.49
IRF1-204ENST00000439555 PDE4CQ08493 712 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 BST2Q10589 180 aaKnown RBP12.02□□□□□ -0.49
IRF1-204ENST00000439555 MORC3Q14149 939 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 STILQ15468 1287 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 PKDCCQ504Y2 493 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 C10orf76Q5T2E6 689 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 SDE2Q6IQ49 451 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 SLC23A3Q6PIS1 610 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 LCLAT1Q6UWP7 414 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 CYP2U1Q7Z449 544 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 PDZD3Q86UT5 571 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 MIB1Q86YT6 1006 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 CPXM2Q8N436 756 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 SPACA7Q96KW9 195 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 NT5C1BQ96P26 610 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 NUSAP1Q9BXS6 441 aaKnown RBP12.02□□□□□ -0.49
IRF1-204ENST00000439555 LRRC4Q9HBW1 653 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 CNGB3Q9NQW8 809 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 MARCH2Q9P0N8 246 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 NUDT5Q9UKK9 219 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 KLK13Q9UKR3 277 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 SLC27A6Q9Y2P4 619 aa12.02□□□□□ -0.49
IRF1-204ENST00000439555 MDM4O15151 490 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 ZBTB24O43167 697 aaPredicted RBP12.01□□□□□ -0.49
IRF1-204ENST00000439555 CD19P15391 556 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 DGKGP49619 791 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 ZNF445P59923 1031 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 GCNT1Q02742 428 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 TRIP4Q15650 581 aaPredicted RBP12.01□□□□□ -0.49
IRF1-204ENST00000439555 CNGA2Q16280 664 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 ZNF423Q2M1K9 1284 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 GOLGA7BQ2TAP0 167 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 MAP7D1Q3KQU3 841 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 UAP1L1Q3KQV9 507 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 CCDC40Q4G0X9 1142 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 SMYD5Q6GMV2 418 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 TPGS1Q6ZTW0 290 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 RSRC2Q7L4I2 434 aaKnown RBP12.01□□□□□ -0.49
IRF1-204ENST00000439555 BHLHA9Q7RTU4 235 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 FAM217AQ8IXS0 508 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 TRIML1Q8N9V2 468 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 LMO3Q8TAP4 145 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 SLC35F5Q8WV83 523 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 NELFBQ8WX92 580 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 PLD4Q96BZ4 506 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 IPO9Q96P70 1041 aaKnown RBP12.01□□□□□ -0.49
IRF1-204ENST00000439555 GABRG3Q99928 467 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 SLC2A11Q9BYW1 496 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 TPSD1Q9BZJ3 242 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 ULBP1Q9BZM6 244 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 AGO1Q9UL18 857 aaKnown RBP12.01□□□□□ -0.49
IRF1-204ENST00000439555 HCN2Q9UL51 889 aa12.01□□□□□ -0.49
IRF1-204ENST00000439555 A0A1W2PQF6 199 aa12□□□□□ -0.49
IRF1-204ENST00000439555 PATE3B3GLJ2 98 aa12□□□□□ -0.49
IRF1-204ENST00000439555 PRRT4C9JH25 899 aa12□□□□□ -0.49
IRF1-204ENST00000439555 TRIM24O15164 1050 aa12□□□□□ -0.49
IRF1-204ENST00000439555 TIMM44O43615 452 aa12□□□□□ -0.49
IRF1-204ENST00000439555 ZNF217O75362 1048 aa12□□□□□ -0.49
IRF1-204ENST00000439555 FGFR1OPO95684 399 aaKnown RBP12□□□□□ -0.49
IRF1-204ENST00000439555 LATS1O95835 1130 aa12□□□□□ -0.49
IRF1-204ENST00000439555 CYBBP04839 570 aa12□□□□□ -0.49
IRF1-204ENST00000439555 HOXB2P14652 356 aa12□□□□□ -0.49
IRF1-204ENST00000439555 CORO1AP31146 461 aaKnown RBP12□□□□□ -0.49
IRF1-204ENST00000439555 HOXD12P35452 270 aa12□□□□□ -0.49
IRF1-204ENST00000439555 EFEMP1Q12805 493 aa12□□□□□ -0.49
IRF1-204ENST00000439555 PAK1Q13153 545 aa12□□□□□ -0.49
IRF1-204ENST00000439555 TRIM61Q5EBN2 209 aa12□□□□□ -0.49
IRF1-204ENST00000439555 FYB2Q5VWT5 728 aa12□□□□□ -0.49
IRF1-204ENST00000439555 PEAR1Q5VY43 1037 aaPredicted RBP12□□□□□ -0.49
IRF1-204ENST00000439555 BSPRYQ5W0U4 402 aa12□□□□□ -0.49
IRF1-204ENST00000439555 ISM2Q6H9L7 571 aa12□□□□□ -0.49
IRF1-204ENST00000439555 KLHL10Q6JEL2 608 aa12□□□□□ -0.49
IRF1-204ENST00000439555 TMEM270Q6UE05 265 aa12□□□□□ -0.49
IRF1-204ENST00000439555 LPCAT2Q7L5N7 544 aa12□□□□□ -0.49
IRF1-204ENST00000439555 RAB44Q7Z6P3 723 aaPredicted RBP12□□□□□ -0.49
IRF1-204ENST00000439555 SYT12Q8IV01 421 aa12□□□□□ -0.49
IRF1-204ENST00000439555 TRIM59Q8IWR1 403 aa12□□□□□ -0.49
IRF1-204ENST00000439555 CHPFQ8IZ52 775 aa12□□□□□ -0.49
IRF1-204ENST00000439555 HMGB4Q8WW32 186 aa12□□□□□ -0.49
IRF1-204ENST00000439555 IRGQQ8WZA9 623 aa12□□□□□ -0.49
IRF1-204ENST00000439555 HSFY1Q96LI6 401 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms