RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 DGKEP52429 567 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 POLR2FP61218 127 aaKnown RBP10.91□□□□□ -0.66
MCF2L-216ENST00000439475 CDK17Q00537 523 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 RING1Q06587 406 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 MTA1Q13330 715 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 NNTQ13423 1086 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 SIM2Q14190 667 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-216ENST00000439475 SYCP1Q15431 976 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 C10orf76Q5T2E6 689 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 ADGRF1Q5T601 910 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 HEATR6Q6AI08 1181 aaKnown RBP10.91□□□□□ -0.66
MCF2L-216ENST00000439475 TOGARAM2Q6ZUX3 1019 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 CEP68Q76N32 757 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 SLC47A2Q86VL8 602 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 C12orf40Q86WS4 652 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 ZNF677Q86XU0 584 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 PASD1Q8IV76 773 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 CCDC117Q8IWD4 279 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-216ENST00000439475 TSTD1Q8NFU3 115 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 CLEC4CQ8WTT0 213 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 RUBCNQ92622 972 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 TMA16Q96EY4 203 aaKnown RBP10.91□□□□□ -0.66
MCF2L-216ENST00000439475 NAA15Q9BXJ9 866 aaKnown RBP10.91□□□□□ -0.66
MCF2L-216ENST00000439475 SLC2A11Q9BYW1 496 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 FAM207AQ9NSI2 230 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-216ENST00000439475 TMEM51Q9NW97 253 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.91□□□□□ -0.663e-6■■■□□ 17.4
MCF2L-216ENST00000439475 ASNSD1Q9NWL6 643 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 NCDNQ9UBB6 729 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 GMEB2Q9UKD1 530 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 MMP17Q9ULZ9 603 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 TLR6Q9Y2C9 796 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 STARD13Q9Y3M8 1113 aa10.91□□□□□ -0.66
MCF2L-216ENST00000439475 LGALS16A8MUM7 142 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 AXIN1O15169 862 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 IRAK2O43187 625 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 TIMM44O43615 452 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 ACSL4O60488 711 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 HSF2BPO75031 334 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 CAVIN2O95810 425 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 PENKP01210 267 aaPredicted RBP10.9□□□□□ -0.66
MCF2L-216ENST00000439475 APOEP02649 317 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 ARID5AQ03989 594 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 NCAPHQ15003 741 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 CRY1Q16526 586 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 DPY19L2P1Q6NXN4 242 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 PKN3Q6P5Z2 889 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 PRR23BQ6ZRT6 265 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 CACNA2D4Q7Z3S7 1137 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 ERICH1Q86X53 443 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 WDTC1Q8N5D0 677 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 CCDC33Q8N5R6 958 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 GPR161Q8N6U8 529 aaKnown RBP10.9□□□□□ -0.66
MCF2L-216ENST00000439475 ZNF513Q8N8E2 541 aaPredicted RBP10.9□□□□□ -0.66
MCF2L-216ENST00000439475 ATP6V0D2Q8N8Y2 350 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 C1orf131Q8NDD1 294 aaKnown RBP10.9□□□□□ -0.66
MCF2L-216ENST00000439475 EZH1Q92800 747 aaPredicted RBP10.9□□□□□ -0.66
MCF2L-216ENST00000439475 BHMTQ93088 406 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 C18orf8Q96DM3 657 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 ERGIC2Q96RQ1 377 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 EPC1Q9H2F5 836 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 NLRC4Q9NPP4 1024 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 RRN3Q9NYV6 651 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 PLK2Q9NYY3 685 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 STOML2Q9UJZ1 356 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 FBXO10Q9UK96 956 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 AJAP1Q9UKB5 411 aaPredicted RBP10.9□□□□□ -0.66
MCF2L-216ENST00000439475 NAALADL1Q9UQQ1 740 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 SLC27A6Q9Y2P4 619 aa10.9□□□□□ -0.66
MCF2L-216ENST00000439475 MYO18AQ92614 2054 aaKnown RBP10.89□□□□□ -0.67
MCF2L-216ENST00000439475 F8VZ95 297 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 NPC1O15118 1278 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 MSI1O43347 362 aaKnown RBP10.89□□□□□ -0.67
MCF2L-216ENST00000439475 GFPT2O94808 682 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 KLF8O95600 359 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-216ENST00000439475 LSM8O95777 96 aaKnown RBP10.89□□□□□ -0.67
MCF2L-216ENST00000439475 TRUB2O95900 331 aaKnown RBP10.89□□□□□ -0.67
MCF2L-216ENST00000439475 FYNP06241 537 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 CISD3P0C7P0 127 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 PNMA6AP0CW24 399 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-216ENST00000439475 SLC2A3P11169 496 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 ZNF18P17022 549 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 NTSR1P30989 418 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 CDH5P33151 784 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-216ENST00000439475 NOS2P35228 1153 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 SOX5P35711 763 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 KIR2DL1P43626 348 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-216ENST00000439475 SLC6A3Q01959 620 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 BYSLQ13895 437 aaKnown RBP10.89□□□□□ -0.67
MCF2L-216ENST00000439475 USP39Q53GS9 565 aaKnown RBP10.89□□□□□ -0.67
MCF2L-216ENST00000439475 DCAF6Q58WW2 860 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 EMC10Q5UCC4 262 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 TAF3Q5VWG9 929 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 FYB2Q5VWT5 728 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 C11orf74Q86VG3 221 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 FAM217AQ8IXS0 508 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 CHPFQ8IZ52 775 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 DEFB106AQ8N104 65 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 PGBD3Q8N328 593 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 PHTF2Q8N3S3 785 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms