RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 COX16Q9P0S2 106 aa17.61■□□□□ 0.41
TARDBP-203ENST00000439080 AGO1Q9UL18 857 aaKnown RBP17.61■□□□□ 0.41
TARDBP-203ENST00000439080 ZNF510Q9Y2H8 683 aa17.61■□□□□ 0.41
TARDBP-203ENST00000439080 SSU72P8A0A1W2PR75 194 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 TCRBV5S1A1TA0A578 114 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 PDGFBP01127 241 aaPredicted RBP17.6■□□□□ 0.41
TARDBP-203ENST00000439080 KRT3P12035 628 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 CTHP32929 405 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 GFPT1Q06210 699 aaPredicted RBP17.6■□□□□ 0.41
TARDBP-203ENST00000439080 JOSD2Q8TAC2 188 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 ZNF653Q96CK0 615 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 TRIM11Q96F44 468 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 MSANTD3Q96H12 275 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 SLC39A13Q96H72 371 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 CFAP57Q96MR6 1250 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 NPY6RQ99463 290 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 CHP1Q99653 195 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 ADAM33Q9BZ11 813 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 ISCUQ9H1K1 167 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 C11orf16Q9NQ32 467 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 RRN3Q9NYV6 651 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 CALCOCO1Q9P1Z2 691 aa17.6■□□□□ 0.41
TARDBP-203ENST00000439080 SPECC1L-ADORA2AF8WAN1 911 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 M0QYT0 321 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 ADH1CP00326 375 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 APOEP02649 317 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 TFE3P19532 575 aaPredicted RBP17.59■□□□□ 0.41
TARDBP-203ENST00000439080 GBP1P32455 592 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 VCPP55072 806 aaKnown RBP17.59■□□□□ 0.41
TARDBP-203ENST00000439080 NME3Q13232 169 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 EIF4EBP2Q13542 120 aaPredicted RBP17.59■□□□□ 0.41
TARDBP-203ENST00000439080 DHCR24Q15392 516 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 SLC18A3Q16572 532 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 ASTE1Q2TB18 679 aaPredicted RBP17.59■□□□□ 0.41
TARDBP-203ENST00000439080 SLC25A52Q3SY17 297 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.59■□□□□ 0.41
TARDBP-203ENST00000439080 UNC45BQ8IWX7 931 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 CHFRQ96EP1 664 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 SHDQ96IW2 340 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 MCEEQ96PE7 176 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 TBCBQ99426 244 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 DDX23Q9BUQ8 820 aaKnown RBP17.59■□□□□ 0.41
TARDBP-203ENST00000439080 MFSD1Q9H3U5 465 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 C8orf33Q9H7E9 229 aaPredicted RBP17.59■□□□□ 0.41
TARDBP-203ENST00000439080 NHEJ1Q9H9Q4 299 aaPredicted RBP17.59■□□□□ 0.41
TARDBP-203ENST00000439080 TBC1D17Q9HA65 648 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 NENFQ9UMX5 172 aa17.59■□□□□ 0.41
TARDBP-203ENST00000439080 GOLGA6L3A6NEY3 463 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 SHISA7A6NL88 538 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 C2CD4BA6NLJ0 364 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 SIGLEC16A6NMB1 481 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 AKR1B10O60218 316 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 LATS1O95835 1130 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 MOCS2O96007 188 aaPredicted RBP17.58■□□□□ 0.4
TARDBP-203ENST00000439080 MYBL1P10243 752 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 ADH5P11766 374 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 GLULP15104 373 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 ABCB4P21439 1286 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 SDC4P31431 198 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 GJA4P35212 333 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 MLLT6P55198 1093 aaPredicted RBP17.58■□□□□ 0.4
TARDBP-203ENST00000439080 ZC3H12AQ5D1E8 599 aaKnown RBP17.58■□□□□ 0.4
TARDBP-203ENST00000439080 LY6G5CQ5SRR4 150 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 PPP1R15BQ5SWA1 713 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 CCDC122Q5T0U0 273 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 CWF19L1Q69YN2 538 aaKnown RBP17.58■□□□□ 0.4
TARDBP-203ENST00000439080 ALKBH5Q6P6C2 394 aaKnown RBP17.58■□□□□ 0.4
TARDBP-203ENST00000439080 TXNDC11Q6PKC3 985 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 RALGPS2Q86X27 583 aaPredicted RBP17.58■□□□□ 0.4
TARDBP-203ENST00000439080 ADGRG2Q8IZP9 1017 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 SPC24Q8NBT2 197 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 RXFP2Q8WXD0 754 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 NT5C3BQ969T7 300 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 GRPEL1Q9HAV7 217 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 SPHK2Q9NRA0 654 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 PIGVQ9NUD9 493 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 PARVAQ9NVD7 372 aa17.58■□□□□ 0.4
TARDBP-203ENST00000439080 CNOT8Q9UFF9 292 aaKnown RBP17.58■□□□□ 0.4
TARDBP-203ENST00000439080 F5P12259 2224 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 PDGFRAP16234 1089 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 GPD1P21695 349 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 CD72P21854 359 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 CCR1P32246 355 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 RFC1P35251 1148 aaPredicted RBP17.57■□□□□ 0.4
TARDBP-203ENST00000439080 STARD6P59095 220 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 RPL7AP62424 266 aaKnown RBP17.57■□□□□ 0.4
TARDBP-203ENST00000439080 NR1H3Q13133 447 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 CDO1Q16878 200 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 GAB4Q2WGN9 574 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 ANO4Q32M45 955 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 PLEKHA7Q6IQ23 1121 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 DCUN1D2Q6PH85 259 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 C1orf228Q6PIY5 440 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 RHBDF2Q6PJF5 856 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 ZNF852Q6ZMS4 543 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 TPGS1Q6ZTW0 290 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 FAM217AQ8IXS0 508 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 CPXM2Q8N436 756 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 FLCNQ8NFG4 579 aa17.57■□□□□ 0.4
TARDBP-203ENST00000439080 PGAP3Q96FM1 320 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms