RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 BPIFB4P59827 614 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 NOMO3P69849 1222 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 GOLGA8FQ08AF8 430 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 GOLGA8DPQ0D2H9 430 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 NR1I3Q14994 352 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 OTUD1Q5VV17 481 aaPredicted RBP13.84□□□□□ -0.19
LINC00399-201ENST00000439008 E4F1Q66K89 784 aaPredicted RBP13.84□□□□□ -0.19
LINC00399-201ENST00000439008 NADSYN1Q6IA69 706 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 TRNP1Q6NT89 227 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 SYNPOQ8N3V7 929 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 ANKRD20A12PQ8NF67 263 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 NEK11Q8NG66 645 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 RPLP0P6Q8NHW5 317 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 USP33Q8TEY7 942 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 CPA5Q8WXQ8 436 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 PLD4Q96BZ4 506 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 PCMTD1Q96MG8 357 aaPredicted RBP13.84□□□□□ -0.19
LINC00399-201ENST00000439008 SLC2A13Q96QE2 648 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 BBS2Q9BXC9 721 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 ARHGEF4Q9NR80 690 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 FBXO10Q9UK96 956 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 FAM186AA6NE01 2351 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 SDK1Q7Z5N4 2213 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 GVINP1Q7Z2Y8 2422 aa13.84□□□□□ -0.19
LINC00399-201ENST00000439008 CHURC1-FNTBB4DL54 471 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 PRRT4C9JH25 899 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 TSPAN3O60637 253 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 CYP1A1P04798 512 aaPredicted RBP13.83□□□□□ -0.2
LINC00399-201ENST00000439008 PTMSP20962 102 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 EIF2DP41214 584 aaKnown RBP13.83□□□□□ -0.2
LINC00399-201ENST00000439008 GABRB2P47870 512 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 CXCL12P48061 93 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 PXNP49023 591 aaPredicted RBP13.83□□□□□ -0.2
LINC00399-201ENST00000439008 YWHAZP63104 245 aaKnown RBP13.83□□□□□ -0.2
LINC00399-201ENST00000439008 AMPD2Q01433 879 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 CDR2Q01850 454 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 C2orf27AQ580R0 203 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 FAM133BQ5BKY9 247 aaKnown RBP13.83□□□□□ -0.2
LINC00399-201ENST00000439008 NAA35Q5VZE5 725 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 OR6B2Q6IFH4 312 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 RFWD3Q6PCD5 774 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 BEND5Q7L4P6 421 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 XYLT1Q86Y38 959 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 DEFB106AQ8N104 65 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 ZBTB44Q8NCP5 570 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 SYT11Q9BT88 431 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 DCLK3Q9C098 648 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 TTYH3Q9C0H2 523 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 POPDC2Q9HBU9 364 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 STOML2Q9UJZ1 356 aa13.83□□□□□ -0.2
LINC00399-201ENST00000439008 PTPRZ1P23471 2315 aaPredicted RBP13.82□□□□□ -0.2
LINC00399-201ENST00000439008 PROB1E7EW31 1015 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 PAPSS2O95340 614 aaPredicted RBP13.82□□□□□ -0.2
LINC00399-201ENST00000439008 TRUB2O95900 331 aaKnown RBP13.82□□□□□ -0.2
LINC00399-201ENST00000439008 PBX1P40424 430 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 STAT1P42224 750 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 GRIA2P42262 883 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 FNTBP49356 437 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 CCR3P51677 355 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 TBX4P57082 545 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 FANCCQ00597 558 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 SLC6A3Q01959 620 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 ARID5AQ03989 594 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 RING1Q06587 406 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 PTP4A2Q12974 167 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 SRSF5Q13243 272 aaKnown RBP13.82□□□□□ -0.2
LINC00399-201ENST00000439008 SKOR2Q2VWA4 1001 aaPredicted RBP13.82□□□□□ -0.2
LINC00399-201ENST00000439008 ZNF528Q3MIS6 628 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 DCAF6Q58WW2 860 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 ZC3H12AQ5D1E8 599 aaKnown RBP13.82□□□□□ -0.2
LINC00399-201ENST00000439008 ASCL5Q7RTU5 278 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 IRF2BP2Q7Z5L9 587 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 CPXM2Q8N436 756 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 CCDC33Q8N5R6 958 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 IL17RCQ8NAC3 791 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 TMEM35BQ8NCS4 154 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 SLC30A5Q8TAD4 765 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 WFDC5Q8TCV5 224 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 SPAG5Q96R06 1193 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 IER2Q9BTL4 223 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 DNAJC17Q9NVM6 304 aaKnown RBP13.82□□□□□ -0.2
LINC00399-201ENST00000439008 ZNF510Q9Y2H8 683 aa13.82□□□□□ -0.2
LINC00399-201ENST00000439008 I6L893 689 aaPredicted RBP13.81□□□□□ -0.2
LINC00399-201ENST00000439008 IRAK2O43187 625 aa13.81□□□□□ -0.2
LINC00399-201ENST00000439008 SART1O43290 800 aaKnown RBP13.81□□□□□ -0.2
LINC00399-201ENST00000439008 LILRB5O75023 590 aa13.81□□□□□ -0.2
LINC00399-201ENST00000439008 ADAM23O75077 832 aa13.81□□□□□ -0.2
LINC00399-201ENST00000439008 GJB6O95452 261 aa13.81□□□□□ -0.2
LINC00399-201ENST00000439008 APODP05090 189 aa13.81□□□□□ -0.2
LINC00399-201ENST00000439008 UNGP13051 313 aaPredicted RBP13.81□□□□□ -0.2
LINC00399-201ENST00000439008 HOXD9P28356 352 aaPredicted RBP13.81□□□□□ -0.2
LINC00399-201ENST00000439008 TIE1P35590 1138 aa13.81□□□□□ -0.2
LINC00399-201ENST00000439008 MRE11P49959 708 aa13.81□□□□□ -0.2
LINC00399-201ENST00000439008 FBXO43Q4G163 708 aa13.81□□□□□ -0.2
LINC00399-201ENST00000439008 RAB6CQ53S08 254 aa13.81□□□□□ -0.2
LINC00399-201ENST00000439008 ADGRF1Q5T601 910 aa13.81□□□□□ -0.2
LINC00399-201ENST00000439008 RNF43Q68DV7 783 aa13.81□□□□□ -0.2
LINC00399-201ENST00000439008 HEATR6Q6AI08 1181 aaKnown RBP13.81□□□□□ -0.2
LINC00399-201ENST00000439008 TMEM92Q6UXU6 159 aa13.81□□□□□ -0.2
LINC00399-201ENST00000439008 SLC26A9Q7LBE3 791 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms