RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 DGKGP49619 791 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 YWHAZP63104 245 aaKnown RBP25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 RING1Q06587 406 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 C10orf76Q5T2E6 689 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 FYB2Q5VWT5 728 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 WDTC1Q8N5D0 677 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 C1orf131Q8NDD1 294 aaKnown RBP25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 IPO4Q8TEX9 1081 aaKnown RBP25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 HHIPQ96QV1 700 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 GANQ9H2C0 597 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 FAM207AQ9NSI2 230 aaPredicted RBP25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 PLK2Q9NYY3 685 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 STOML2Q9UJZ1 356 aa25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 SMG5Q9UPR3 1016 aaKnown RBP25.78■■□□□ 1.72
RAPGEF1-206ENST00000438647 FAM186AA6NE01 2351 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 IGLV3-27P01718 113 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 FYNP06241 537 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 GLI1P08151 1106 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 KIR2DL1P43626 348 aaPredicted RBP25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 SLC11A2P49281 568 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 TBX4P57082 545 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 EOGTQ5NDL2 527 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 ADGRF1Q5T601 910 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 SFTPA1Q8IWL2 248 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 TMEM35BQ8NCS4 154 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 TSTD1Q8NFU3 115 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 DQX1Q8TE96 717 aaKnown RBP25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 PCMTD1Q96MG8 357 aaPredicted RBP25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 CPXM1Q96SM3 734 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 SYNCQ9H7C4 482 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 NAALADL1Q9UQQ1 740 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 STARD13Q9Y3M8 1113 aa25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 PTPRZ1P23471 2315 aaPredicted RBP25.77■■□□□ 1.72
RAPGEF1-206ENST00000438647 DGKEP52429 567 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 POLR2FP61218 127 aaKnown RBP25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 UBXN1Q04323 297 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 MPPE1Q53F39 396 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 EFHC1Q5JVL4 640 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 TOGARAM2Q6ZUX3 1019 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 CCDC33Q8N5R6 958 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 ALLCQ8N6M5 410 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 ZNF513Q8N8E2 541 aaPredicted RBP25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 IL17RCQ8NAC3 791 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 TXNDC5Q8NBS9 432 aaKnown RBP25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 DDI1Q8WTU0 396 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 RUBCNQ92622 972 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 IRX2Q9BZI1 471 aaPredicted RBP25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 ASNSD1Q9NWL6 643 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 FBXO10Q9UK96 956 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 TLR6Q9Y2C9 796 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 SIK3Q9Y2K2 1263 aa25.76■■□□□ 1.71
RAPGEF1-206ENST00000438647 TRIM24O15164 1050 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 KLF8O95600 359 aaPredicted RBP25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 KLK7P49862 253 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 SIM2Q14190 667 aaPredicted RBP25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 SYCP1Q15431 976 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 CRY1Q16526 586 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 ZDHHC17Q8IUH5 632 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 NEK11Q8NG66 645 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 AZIN2Q96A70 460 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 SPAG5Q96R06 1193 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 HINFPQ9BQA5 517 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 SLC2A11Q9BYW1 496 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 HSD3B7Q9H2F3 369 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 POLR3BQ9NW08 1133 aaPredicted RBP25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 EBF1Q9UH73 591 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 SLC27A6Q9Y2P4 619 aa25.75■■□□□ 1.71
RAPGEF1-206ENST00000438647 AXIN1O15169 862 aa25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 HSF2BPO75031 334 aa25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 CISD3P0C7P0 127 aa25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 CDH5P33151 784 aaPredicted RBP25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 PXNP49023 591 aaPredicted RBP25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 ZNF165P49910 485 aa25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 EMC10Q5UCC4 262 aa25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 PRR23BQ6ZRT6 265 aa25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 ZNF677Q86XU0 584 aa25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 ERGIC2Q96RQ1 377 aa25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 DDX50Q9BQ39 737 aaKnown RBP25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 NCDNQ9UBB6 729 aa25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 TJP2Q9UDY2 1190 aa25.74■■□□□ 1.71
RAPGEF1-206ENST00000438647 IRAK2O43187 625 aa25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 HRO43593 1189 aa25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 ALDH1A2O94788 518 aa25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 LSM8O95777 96 aaKnown RBP25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 CHRM1P11229 460 aaPredicted RBP25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 PTPN20Q4JDL3 420 aa25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 TAF3Q5VWG9 929 aa25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 SYPL2Q5VXT5 272 aa25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 OR6B2Q6IFH4 312 aa25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 CEP68Q76N32 757 aa25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 TAC4Q86UU9 113 aa25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 MSANTD4Q8NCY6 345 aa25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 EPS8L1Q8TE68 723 aa25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 TMA16Q96EY4 203 aaKnown RBP25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 POLMQ9NP87 494 aaPredicted RBP25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 NLRC4Q9NPP4 1024 aa25.73■■□□□ 1.71
RAPGEF1-206ENST00000438647 ANTXRLA6NF34 631 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 SGK1O00141 431 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 ACSL4O60488 711 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 ATP1A3P13637 1013 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms