RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 PMF1Q6P1K2 205 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 TOGARAM2Q6ZUX3 1019 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 FAM217AQ8IXS0 508 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 MLKLQ8NB16 471 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 NDRG1Q92597 394 aaKnown RBP18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 EDEM1Q92611 657 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 KAT5Q92993 513 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 GABRG3Q99928 467 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 INTS2Q9H0H0 1204 aaKnown RBP18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 CNTN6Q9UQ52 1028 aa18.33■□□□□ 0.52
SBDSP1-203ENST00000437201 EML5Q05BV3 1969 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 KHNYNO15037 678 aaKnown RBP18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 SART1O43290 800 aaKnown RBP18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 AP5Z1O43299 807 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 TIMM44O43615 452 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 KRT5P13647 590 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 GABRG2P18507 467 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 BCKDHBP21953 392 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 BRD2P25440 801 aaKnown RBP18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 WASP42768 502 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 RGS7P49802 495 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 MFAP3P55082 362 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 STARD3Q14849 445 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 EIF4HQ15056 248 aaKnown RBP18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 MAP7D1Q3KQU3 841 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 STPG1Q5TH74 334 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 ANKS1BQ7Z6G8 1248 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 CREBRFQ8IUR6 639 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 ARHGEF19Q8IW93 802 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 UNC45BQ8IWX7 931 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 IPO4Q8TEX9 1081 aaKnown RBP18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 RLN3Q8WXF3 142 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 TRIM62Q9BVG3 475 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 IRX2Q9BZI1 471 aaPredicted RBP18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 UBE2TQ9NPD8 197 aaPredicted RBP18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 SFMBT1Q9UHJ3 866 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 HCN2Q9UL51 889 aa18.32■□□□□ 0.52
SBDSP1-203ENST00000437201 A0A1W2PQF6 199 aa18.31■□□□□ 0.52
SBDSP1-203ENST00000437201 ACADSBP45954 432 aa18.31■□□□□ 0.52
SBDSP1-203ENST00000437201 MEA1Q16626 185 aa18.31■□□□□ 0.52
SBDSP1-203ENST00000437201 ADGRF1Q5T601 910 aa18.31■□□□□ 0.52
SBDSP1-203ENST00000437201 NUGGCQ68CJ6 796 aa18.31■□□□□ 0.52
SBDSP1-203ENST00000437201 RNF43Q68DV7 783 aa18.31■□□□□ 0.52
SBDSP1-203ENST00000437201 SMYD5Q6GMV2 418 aa18.31■□□□□ 0.52
SBDSP1-203ENST00000437201 MSANTD2Q6P1R3 559 aa18.31■□□□□ 0.52
SBDSP1-203ENST00000437201 ACOX2Q99424 681 aa18.31■□□□□ 0.52
SBDSP1-203ENST00000437201 SMOC1Q9H4F8 434 aa18.31■□□□□ 0.52
SBDSP1-203ENST00000437201 STOML2Q9UJZ1 356 aa18.31■□□□□ 0.52
SBDSP1-203ENST00000437201 SDK1Q7Z5N4 2213 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 DNAH14Q0VDD8 3507 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 LTFP02788 710 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 SLC11A2P49281 568 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 ARID5AQ03989 594 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 TPD52L1Q16890 204 aaPredicted RBP18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 PPM1JQ5JR12 505 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 ZNF557Q8N988 423 aaPredicted RBP18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 STK32AQ8WU08 396 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 PIGKQ92643 395 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 TMA16Q96EY4 203 aaKnown RBP18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 PIWIL1Q96J94 861 aaKnown RBP18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 KREMEN1Q96MU8 473 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 ZSWIM1Q9BR11 485 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 EDEM2Q9BV94 578 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 ST7Q9NRC1 585 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 CACNA2D2Q9NY47 1150 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 CALCOCO1Q9P1Z2 691 aa18.3■□□□□ 0.52
SBDSP1-203ENST00000437201 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 GTPBP10A4D1E9 387 aaKnown RBP18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 SYNCRIPO60506 623 aaKnown RBP18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 PRKCSHP14314 528 aaPredicted RBP18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 HOXD12P35452 270 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 RPL6Q02878 288 aaKnown RBP18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 RING1Q06587 406 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 DAB2IPQ5VWQ8 1189 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 LYSMD4Q5XG99 296 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 TRIM65Q6PJ69 517 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 GBP6Q6ZN66 633 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 SYT12Q8IV01 421 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 FAM114A1Q8IWE2 563 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 TMEFF1Q8IYR6 380 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 AZIN2Q96A70 460 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 DDX50Q9BQ39 737 aaKnown RBP18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 NUSAP1Q9BXS6 441 aaKnown RBP18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 RXFP3Q9NSD7 469 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 ELOVL2Q9NXB9 296 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 THAP10Q9P2Z0 257 aaPredicted RBP18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 EVLQ9UI08 416 aaPredicted RBP18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 MBD1Q9UIS9 605 aaPredicted RBP18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 STON1Q9Y6Q2 735 aa18.29■□□□□ 0.52
SBDSP1-203ENST00000437201 PIK3R2O00459 728 aa18.28■□□□□ 0.52
SBDSP1-203ENST00000437201 IRAK2O43187 625 aa18.28■□□□□ 0.52
SBDSP1-203ENST00000437201 NCAM1P13591 858 aa18.28■□□□□ 0.52
SBDSP1-203ENST00000437201 NDUFV2P19404 249 aa18.28■□□□□ 0.52
SBDSP1-203ENST00000437201 GPD2P43304 727 aa18.28■□□□□ 0.52
SBDSP1-203ENST00000437201 RPL34P49207 117 aaKnown RBP18.28■□□□□ 0.52
SBDSP1-203ENST00000437201 LMAN2Q12907 356 aa18.28■□□□□ 0.52
SBDSP1-203ENST00000437201 EXOC3L4Q17RC7 722 aa18.28■□□□□ 0.52
SBDSP1-203ENST00000437201 GEN1Q17RS7 908 aa18.28■□□□□ 0.52
SBDSP1-203ENST00000437201 MPP7Q5T2T1 576 aa18.28■□□□□ 0.52
SBDSP1-203ENST00000437201 TCEAL6Q6IPX3 200 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms