RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CLIC3O95833 236 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 MCF2P10911 925 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 UNGP13051 313 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 IDH3AP50213 366 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 WASHC5Q12768 1159 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 GEN1Q17RS7 908 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 TEX44Q53QW1 395 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SETD3Q86TU7 594 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 RCOR2Q8IZ40 523 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 LARGE2Q8N3Y3 721 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 NAT8LQ8N9F0 302 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SIRPGQ9P1W8 387 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 POU2F3Q9UKI9 436 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 NOX1Q9Y5S8 564 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 KCNH1O95259 989 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 TKTP29401 623 aaKnown RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 EN1Q05925 392 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 NEDD8Q15843 81 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 TRMT10BQ6PF06 316 aaKnown RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 BORAQ6PGQ7 559 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 TMEM270Q6UE05 265 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 STARD8Q92502 1023 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 HERC2P3Q9BVR0 1158 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 ADA2Q9NZK5 511 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 ZC3H7BQ9UGR2 993 aaKnown RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 ITGA11Q9UKX5 1188 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 ST14Q9Y5Y6 855 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 PABPC1P11940 636 aaKnown RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 AARS2Q5JTZ9 985 aaKnown RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 NXNQ6DKJ4 435 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SNRNP48Q6IEG0 339 aaKnown RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SH2D5Q6ZV89 423 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SV2AQ7L0J3 742 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 FBXL13Q8NEE6 735 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 FAF2Q96CS3 445 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SLC29A1Q99808 456 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 WDR55Q9H6Y2 383 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 UTP6Q9NYH9 597 aaKnown RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 IGSF9Q9P2J2 1179 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 TXNDC16Q9P2K2 825 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 RIMS3Q9UJD0 308 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 FARP1Q9Y4F1 1045 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 MYPNQ86TC9 1320 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 WDR64B1ANS9 1081 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 GAS7O60861 476 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 CFBP00751 764 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 NKX2-5P52952 324 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 KLF10Q13118 480 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 TUBB3Q13509 450 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SF3B4Q15427 424 aaKnown RBP eCLIP7.68□□□□□ -1.181e-7■■■□□ 16.3
CPSF6-202ENST00000435070 ADRM1Q16186 407 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SNRNP35Q16560 246 aaKnown RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 CEP55Q53EZ4 464 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 GJC2Q5T442 439 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 IL23RQ5VWK5 629 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 CYP2R1Q6VVX0 501 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 MAVSQ7Z434 540 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 TAMM41Q96BW9 452 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 TRIM11Q96F44 468 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SPATA17Q96L03 361 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 CALN1Q9BXU9 219 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 KLC2Q9H0B6 622 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 CXorf21Q9HAI6 301 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 C17orf75Q9HAS0 396 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 GID8Q9NWU2 228 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 DAPK2Q9UIK4 370 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 VAV3Q9UKW4 847 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 ZNRF3Q9ULT6 936 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SNED1Q8TER0 1413 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 EIF3FO00303 357 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 KLF11O14901 512 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 ENTPD3O75355 529 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 RFPL1O75677 317 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 RGS21Q2M5E4 152 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF829Q3KNS6 432 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 TEDDM1Q5T9Z0 273 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 LGSNQ5TDP6 509 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 TPTE2Q6XPS3 522 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 ATG14Q6ZNE5 492 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 DAW1Q8N136 415 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SLC15A4Q8N697 577 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 FEZF2Q8TBJ5 459 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 NSMCE3Q96MG7 304 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 CEP44Q9C0F1 390 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 RAB6BQ9NRW1 208 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 C20orf96Q9NUD7 363 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SRP68Q9UHB9 627 aaKnown RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 GIT1Q9Y2X7 761 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SPO11Q9Y5K1 396 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 A0A1W2PQ67 120 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 WDR46O15213 610 aaKnown RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 KRT38O76015 456 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 F7P08709 466 aaPredicted RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 CSH1P0DML2 217 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 CSH2P0DML3 217 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 ANO4Q32M45 955 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 MTX3Q5HYI7 312 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 N4BP2L1Q5TBK1 243 aaPredicted RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 GALNT18Q6P9A2 607 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 GPR180Q86V85 440 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms