RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 KIAA1524Q8TCG1 905 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 TRMT2BQ96GJ1 504 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 TOE1Q96GM8 510 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 GSDMAQ96QA5 445 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 ZNF518BQ9C0D4 1074 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 ATXN2Q99700 1313 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 ZNFX1Q9P2E3 1918 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 MYH6P13533 1939 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 ZSCAN5CA6NGD5 496 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 LTFP02788 710 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 CALB1P05937 261 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 CEACAM1P13688 526 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 MC1RQ01726 317 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 DNM1Q05193 864 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 ELP6Q0PNE2 266 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 SPA17Q15506 151 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 MBLAC2Q68D91 279 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 ISM2Q6H9L7 571 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 TTC23LQ6PF05 361 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 IL22RA1Q8N6P7 574 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 C7orf25Q9BPX7 421 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 CINPQ9BW66 212 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 PCED1AQ9H1Q7 454 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 TM7SF3Q9NS93 570 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 CACNA2D2Q9NY47 1150 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 GCNT4Q9P109 453 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 MCM3APO60318 1980 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 A0A1W2PQH9 124 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CBX4O00257 560 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ARHGAP33O14559 1287 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CYP11A1P05108 521 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 SERPINB6P35237 376 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 RAP1GAPP47736 663 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ATXN1P54253 815 aaKnown RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 SLC12A3P55017 1021 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ADIGQ0VDE8 80 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 PRPSAP1Q14558 356 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 DENND2CQ68D51 928 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 KLHL35Q6PF15 583 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 GUF1Q8N442 669 aaKnown RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 RLN3Q8WXF3 142 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 NAT6Q93015 286 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CNDP2Q96KP4 475 aaKnown RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 MYOCQ99972 504 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CLSTN2Q9H4D0 955 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ATP13A1Q9HD20 1204 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CEP72Q9P209 647 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 EIF2B4Q9UI10 523 aaKnown RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 STON1Q9Y6Q2 735 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 P4HA2O15460 535 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ZNF202O95125 648 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CSTF2P33240 577 aaKnown RBP eCLIP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 SLC12A1Q13621 1099 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ZNF284Q2VY69 593 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 MANEAQ5SRI9 462 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 FAM102AQ5T9C2 384 aaPredicted RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 TRIM72Q6ZMU5 477 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 DCP2Q8IU60 420 aaKnown RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 RBBP8NLQ8NC74 664 aaPredicted RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 KCTD13Q8WZ19 329 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ZNF707Q96C28 371 aaPredicted RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 PCED1BQ96HM7 432 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ULBP1Q9BZM6 244 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 TRIM5Q9C035 493 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CACNA1GO43497 2377 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ANKRD63C9JTQ0 380 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ANHXE9PGG2 379 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 PIGRP01833 764 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 SERPINF2P08697 491 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 PFKFB1P16118 471 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ENGP17813 658 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CSRP1P21291 193 aaKnown RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 TNK2Q07912 1038 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 GSE1Q14687 1217 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 TCTN1Q2MV58 587 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 UNQ6494/PRO21346Q6UXR6 183 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ZNF605Q86T29 641 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 NOP9Q86U38 636 aaKnown RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 DHX40Q8IX18 779 aaKnown RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 LZTR1Q8N653 840 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 UBA3Q8TBC4 463 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 NTPCRQ9BSD7 190 aaKnown RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 SLC29A3Q9BZD2 475 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 EDEM3Q9BZQ6 932 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 GGA2Q9UJY4 613 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 PROB1E7EW31 1015 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 KCNK5O95279 499 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 SEC24AO95486 1093 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 AMD1P17707 334 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 TPI1P60174 286 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CUL2Q13617 745 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ASIC2Q16515 512 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 POM121L1PQ3SYA9 428 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 PHF19Q5T6S3 580 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 DCAF12L1Q5VU92 463 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 C11orf57Q6ZUT1 292 aaPredicted RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 PRICKLE2Q7Z3G6 844 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms