RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 BNIPLQ7Z465 357 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 UNC45BQ8IWX7 931 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 SYCE1Q8N0S2 351 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 RNF10Q8N5U6 811 aaKnown RBP11.45□□□□□ -0.58
CHD4-202ENST00000430771 SH3RF2Q8TEC5 729 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 DEPDC1BQ8WUY9 529 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 ATXN2LQ8WWM7 1075 aaKnown RBP11.45□□□□□ -0.58
CHD4-202ENST00000430771 USP13Q92995 863 aaPredicted RBP11.45□□□□□ -0.58
CHD4-202ENST00000430771 RNF34Q969K3 372 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 ZFRQ96KR1 1074 aaKnown RBP11.45□□□□□ -0.58
CHD4-202ENST00000430771 ALS2CR12Q96Q35 445 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 CYP2S1Q96SQ9 504 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 KLF16Q9BXK1 252 aaPredicted RBP11.45□□□□□ -0.58
CHD4-202ENST00000430771 LACRTQ9GZZ8 138 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 RNF38Q9H0F5 515 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 ZFP14Q9HCL3 533 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 PRDM6Q9NQX0 595 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 CFAP97Q9P2B7 532 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 PRKAG3Q9UGI9 489 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 SLC12A6Q9UHW9 1150 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 TFR2Q9UP52 801 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 ZNF510Q9Y2H8 683 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 TMEM110-MUSTN1A8MSY1 372 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 C2CD4DB7Z1M9 353 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 BUB1O43683 1085 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 PRPSAP2O60256 369 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 ECI2O75521 394 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 STC2O76061 302 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 IGLV3-27P01718 113 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 HMBSP08397 361 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 PCK1P35558 622 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 SLC1A1P43005 524 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 PITX1P78337 314 aaPredicted RBP11.44□□□□□ -0.58
CHD4-202ENST00000430771 ZNF252P-AS1Q0IIN9 211 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 HADHQ16836 314 aaKnown RBP11.44□□□□□ -0.58
CHD4-202ENST00000430771 ACBD5Q5T8D3 534 aaPredicted RBP11.44□□□□□ -0.58
CHD4-202ENST00000430771 CC2D1AQ6P1N0 951 aaPredicted RBP11.44□□□□□ -0.58
CHD4-202ENST00000430771 YAF2Q8IY57 180 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 ZDHHC14Q8IZN3 488 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 ATP6V0D2Q8N8Y2 350 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 TPCN2Q8NHX9 752 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 BPIFB1Q8TDL5 484 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 CENPIQ92674 756 aaPredicted RBP11.44□□□□□ -0.58
CHD4-202ENST00000430771 NTAN1Q96AB6 310 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 ELSPBP1Q96BH3 223 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 SLC39A13Q96H72 371 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 BTBD6Q96KE9 485 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 RPGRIP1Q96KN7 1286 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 FCRL2Q96LA5 508 aaPredicted RBP11.44□□□□□ -0.58
CHD4-202ENST00000430771 ZSWIM3Q96MP5 696 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 DDX50Q9BQ39 737 aaKnown RBP11.44□□□□□ -0.58
CHD4-202ENST00000430771 TRIM7Q9C029 511 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 SMG9Q9H0W8 520 aaKnown RBP11.44□□□□□ -0.58
CHD4-202ENST00000430771 PIGVQ9NUD9 493 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHD4-202ENST00000430771 GUCA1BQ9UMX6 200 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 CCL26Q9Y258 94 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 PRUNE2Q8WUY3 3088 aa11.44□□□□□ -0.58
CHD4-202ENST00000430771 E2F8A0AVK6 867 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 HEPACAM2A8MVW5 462 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 SLC9A3R1O14745 358 aaPredicted RBP11.43□□□□□ -0.58
CHD4-202ENST00000430771 SPOPO43791 374 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 LRCH4O75427 683 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 ENDOD1O94919 500 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 MOCS2O96007 188 aaPredicted RBP11.43□□□□□ -0.58
CHD4-202ENST00000430771 TFE3P19532 575 aaPredicted RBP11.43□□□□□ -0.58
CHD4-202ENST00000430771 FCARP24071 287 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 MSNP26038 577 aaKnown RBP11.43□□□□□ -0.58
CHD4-202ENST00000430771 CORO1AP31146 461 aaKnown RBP11.43□□□□□ -0.58
CHD4-202ENST00000430771 SLC11A2P49281 568 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 CXCR3P49682 368 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 HDAC4P56524 1084 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 EIF4EBP2Q13542 120 aaPredicted RBP11.43□□□□□ -0.58
CHD4-202ENST00000430771 HTR4Q13639 388 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 MESDQ14696 234 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 EFHC2Q5JST6 749 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 DAAM2Q86T65 1068 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 FAM131BQ86XD5 332 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 ADHFE1Q8IWW8 467 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 TTC16Q8NEE8 873 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 NXPE3Q969Y0 559 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 OTUB2Q96DC9 234 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 BTN2A3PQ96KV6 586 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 WDCPQ9H6R7 721 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 LZTFL1Q9NQ48 299 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 THG1LQ9NWX6 298 aaKnown RBP11.43□□□□□ -0.58
CHD4-202ENST00000430771 ARHGEF38Q9NXL2 777 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 IGSF9Q9P2J2 1179 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 TBC1D14Q9P2M4 693 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 TRIM10Q9UDY6 481 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 PYCARDQ9ULZ3 195 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 COL6A3P12111 3177 aa11.43□□□□□ -0.58
CHD4-202ENST00000430771 SPTBN5Q9NRC6 3674 aaKnown RBP11.42□□□□□ -0.58
CHD4-202ENST00000430771 TYW5A2RUC4 315 aaKnown RBP11.42□□□□□ -0.58
CHD4-202ENST00000430771 PSTPIP1O43586 416 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 BUB1BO60566 1050 aaPredicted RBP11.42□□□□□ -0.58
CHD4-202ENST00000430771 MOCS3O95396 460 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 PSMC3P17980 439 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 MIPP30301 263 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 SSR1P43307 286 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms