RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 GFPT1Q06210 699 aaPredicted RBP12.95□□□□□ -0.34
USP40-205ENST00000430158 TNK2Q07912 1038 aa12.95□□□□□ -0.34
USP40-205ENST00000430158 DCAF6Q58WW2 860 aa12.95□□□□□ -0.34
USP40-205ENST00000430158 ARTNQ5T4W7 220 aa12.95□□□□□ -0.34
USP40-205ENST00000430158 TRIM68Q6AZZ1 485 aa12.95□□□□□ -0.34
USP40-205ENST00000430158 ALKBH5Q6P6C2 394 aaKnown RBP12.95□□□□□ -0.34
USP40-205ENST00000430158 BBS7Q8IWZ6 715 aa12.95□□□□□ -0.34
USP40-205ENST00000430158 FAM217AQ8IXS0 508 aa12.95□□□□□ -0.34
USP40-205ENST00000430158 ADGRG2Q8IZP9 1017 aa12.95□□□□□ -0.34
USP40-205ENST00000430158 ADAM32Q8TC27 787 aa12.95□□□□□ -0.34
USP40-205ENST00000430158 CENPIQ92674 756 aaPredicted RBP12.95□□□□□ -0.34
USP40-205ENST00000430158 EDAQ92838 391 aa12.95□□□□□ -0.34
USP40-205ENST00000430158 DNASE1L2Q92874 299 aa12.95□□□□□ -0.34
USP40-205ENST00000430158 PGAP3Q96FM1 320 aaPredicted RBP12.95□□□□□ -0.34
USP40-205ENST00000430158 TRIM62Q9BVG3 475 aa12.95□□□□□ -0.34
USP40-205ENST00000430158 METTL5Q9NRN9 209 aaKnown RBP12.95□□□□□ -0.34
USP40-205ENST00000430158 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.95□□□□□ -0.34
USP40-205ENST00000430158 WNT6Q9Y6F9 365 aa12.95□□□□□ -0.34
USP40-205ENST00000430158 MIA3Q5JRA6 1907 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 ZNF318Q5VUA4 2279 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 KCNU1A8MYU2 1149 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 I6L893 689 aaPredicted RBP12.94□□□□□ -0.34
USP40-205ENST00000430158 SCAMP3O14828 347 aaKnown RBP12.94□□□□□ -0.34
USP40-205ENST00000430158 RNASE9P60153 205 aaKnown RBP12.94□□□□□ -0.34
USP40-205ENST00000430158 RPL7AP62424 266 aaKnown RBP12.94□□□□□ -0.34
USP40-205ENST00000430158 OGDHQ02218 1023 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 PDGFRLQ15198 375 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 SLC25A52Q3SY17 297 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 CCDC14Q49A88 953 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 RAB6CQ53S08 254 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 RHBDF2Q6PJF5 856 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 EMC1Q8N766 993 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 SPC24Q8NBT2 197 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 RXFP2Q8WXD0 754 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 GOLGA1Q92805 767 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 IRF7Q92985 503 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 AZIN2Q96A70 460 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 PLD4Q96BZ4 506 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.94□□□□□ -0.34
USP40-205ENST00000430158 NACA2Q9H009 215 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 RAB6CQ9H0N0 254 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 ANLNQ9NQW6 1124 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 ZNHIT6Q9NWK9 470 aaKnown RBP12.94□□□□□ -0.34
USP40-205ENST00000430158 DUS2Q9NX74 493 aaKnown RBP12.94□□□□□ -0.34
USP40-205ENST00000430158 RRN3Q9NYV6 651 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 WNT16Q9UBV4 365 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 AGO1Q9UL18 857 aaKnown RBP12.94□□□□□ -0.34
USP40-205ENST00000430158 TLR6Q9Y2C9 796 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 DOCK4Q8N1I0 1966 aa12.94□□□□□ -0.34
USP40-205ENST00000430158 CACNA1IQ9P0X4 2223 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 KRBA1A5PL33 1030 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 TMEM191CA6NGB0 347 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 TNFRSF10AO00220 468 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 CYP1A2P05177 515 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 HMBSP08397 361 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 IRF1P10914 325 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 KRT3P12035 628 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 CORO1AP31146 461 aaKnown RBP12.93□□□□□ -0.34
USP40-205ENST00000430158 PTPN9P43378 593 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 CXCR3P49682 368 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 KPNA1P52294 538 aaPredicted RBP12.93□□□□□ -0.34
USP40-205ENST00000430158 GALCP54803 685 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 MLLT6P55198 1093 aaPredicted RBP12.93□□□□□ -0.34
USP40-205ENST00000430158 TBX4P57082 545 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 ZNF252P-AS1Q0IIN9 211 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 TSR1Q2NL82 804 aaKnown RBP12.93□□□□□ -0.34
USP40-205ENST00000430158 CCDC122Q5T0U0 273 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 NADSYN1Q6IA69 706 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 VPS36Q86VN1 386 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 OTUB2Q96DC9 234 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 ARHGEF26Q96DR7 871 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 CFAP57Q96MR6 1250 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 SERPINB11Q96P15 392 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 TBCBQ99426 244 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 PACSIN1Q9BY11 444 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 TRIM7Q9C029 511 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 THAP2Q9H0W7 228 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 EBF3Q9H4W6 596 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 EPHX3Q9H6B9 360 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 BRD9Q9H8M2 597 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 PIGVQ9NUD9 493 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 SPTLC3Q9NUV7 552 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 THG1LQ9NWX6 298 aaKnown RBP12.93□□□□□ -0.34
USP40-205ENST00000430158 GTSE1Q9NYZ3 720 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 TBC1D14Q9P2M4 693 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 CACNA1HO95180 2353 aa12.93□□□□□ -0.34
USP40-205ENST00000430158 ANKRD62A6NC57 917 aa12.92□□□□□ -0.34
USP40-205ENST00000430158 SLC9A3R1O14745 358 aaPredicted RBP12.92□□□□□ -0.34
USP40-205ENST00000430158 CAPN9O14815 690 aa12.92□□□□□ -0.34
USP40-205ENST00000430158 LATS1O95835 1130 aa12.92□□□□□ -0.34
USP40-205ENST00000430158 CYP17A1P05093 508 aa12.92□□□□□ -0.34
USP40-205ENST00000430158 MYBL1P10243 752 aa12.92□□□□□ -0.34
USP40-205ENST00000430158 PDGFRAP16234 1089 aa12.92□□□□□ -0.34
USP40-205ENST00000430158 MRE11P49959 708 aa12.92□□□□□ -0.34
USP40-205ENST00000430158 ZNF143P52747 638 aaPredicted RBP12.92□□□□□ -0.34
USP40-205ENST00000430158 ATXN1P54253 815 aaKnown RBP12.92□□□□□ -0.34
USP40-205ENST00000430158 SIGLEC14Q08ET2 396 aa12.92□□□□□ -0.34
USP40-205ENST00000430158 RUNX3Q13761 415 aa12.92□□□□□ -0.34
USP40-205ENST00000430158 SLC44A4Q53GD3 710 aa12.92□□□□□ -0.34
USP40-205ENST00000430158 FAM133BQ5BKY9 247 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms