RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 TRIM11Q96F44 468 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 SLC39A13Q96H72 371 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 CFAP57Q96MR6 1250 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 ADAM33Q9BZ11 813 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 EPHX3Q9H6B9 360 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 ECT2Q9H8V3 914 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 CNOT8Q9UFF9 292 aaKnown RBP23.24■■□□□ 1.31
PTPN18-205ENST00000428843 AGO1Q9UL18 857 aaKnown RBP23.24■■□□□ 1.31
PTPN18-205ENST00000428843 ZNF510Q9Y2H8 683 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 COL4A3Q01955 1670 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 SYNJ2BP-COX16A0A087WUM0 186 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 KRBA1A5PL33 1030 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 C2CD4BA6NLJ0 364 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 M0QYT0 321 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 AKR1B10O60218 316 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 NFATC1O95644 943 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 ABCB4P21439 1286 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 RFC1P35251 1148 aaPredicted RBP23.23■■□□□ 1.31
PTPN18-205ENST00000428843 NME3Q13232 169 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 MLF2Q15773 248 aaPredicted RBP23.23■■□□□ 1.31
PTPN18-205ENST00000428843 SLC25A52Q3SY17 297 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 PPP1R15BQ5SWA1 713 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 NUGGCQ68CJ6 796 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 PLEKHA7Q6IQ23 1121 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 CPA6Q8N4T0 437 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 TBCBQ99426 244 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 ARHGEF3Q9NR81 526 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 COX16Q9P0S2 106 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 CALCOCO1Q9P1Z2 691 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 MYOFQ9NZM1 2061 aa23.23■■□□□ 1.31
PTPN18-205ENST00000428843 MYBL1P10243 752 aa23.22■■□□□ 1.31
PTPN18-205ENST00000428843 PDGFRAP16234 1089 aa23.22■■□□□ 1.31
PTPN18-205ENST00000428843 SOX9P48436 509 aa23.22■■□□□ 1.31
PTPN18-205ENST00000428843 MAMLD1Q13495 774 aa23.22■■□□□ 1.31
PTPN18-205ENST00000428843 ZC3H12AQ5D1E8 599 aaKnown RBP23.22■■□□□ 1.31
PTPN18-205ENST00000428843 UNC45BQ8IWX7 931 aa23.22■■□□□ 1.31
PTPN18-205ENST00000428843 SIX5Q8N196 739 aa23.22■■□□□ 1.31
PTPN18-205ENST00000428843 MCEEQ96PE7 176 aa23.22■■□□□ 1.31
PTPN18-205ENST00000428843 THAP2Q9H0W7 228 aa23.22■■□□□ 1.31
PTPN18-205ENST00000428843 SPTLC3Q9NUV7 552 aa23.22■■□□□ 1.31
PTPN18-205ENST00000428843 PARVAQ9NVD7 372 aa23.22■■□□□ 1.31
PTPN18-205ENST00000428843 MYO1AQ9UBC5 1043 aa23.22■■□□□ 1.31
PTPN18-205ENST00000428843 MUC3AQ02505 3323 aa23.22■■□□□ 1.31
PTPN18-205ENST00000428843 TECTAO75443 2155 aa23.21■■□□□ 1.31
PTPN18-205ENST00000428843 CYP17A1P05093 508 aa23.21■■□□□ 1.31
PTPN18-205ENST00000428843 FECHP22830 423 aa23.21■■□□□ 1.31
PTPN18-205ENST00000428843 RPL7AP62424 266 aaKnown RBP23.21■■□□□ 1.31
PTPN18-205ENST00000428843 DHCR24Q15392 516 aa23.21■■□□□ 1.31
PTPN18-205ENST00000428843 CCDC14Q49A88 953 aa23.21■■□□□ 1.31
PTPN18-205ENST00000428843 RHBDF2Q6PJF5 856 aa23.21■■□□□ 1.31
PTPN18-205ENST00000428843 TPRG1Q6ZUI0 275 aa23.21■■□□□ 1.31
PTPN18-205ENST00000428843 PGAP3Q96FM1 320 aaPredicted RBP23.21■■□□□ 1.31
PTPN18-205ENST00000428843 PIAS3Q9Y6X2 628 aa23.21■■□□□ 1.31
PTPN18-205ENST00000428843 TMEM221A6NGB7 291 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 GOLGA6L6A8MZA4 724 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 M0R296 226 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 DLL1O00548 723 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 LATS1O95835 1130 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 GLULP15104 373 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 GPD1P21695 349 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 SDC4P31431 198 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 GALCP54803 685 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 ATP11AP98196 1134 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 DEUP1Q05D60 604 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 NR1H3Q13133 447 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 C15orf59Q2T9L4 293 aaPredicted RBP23.2■■□□□ 1.3
PTPN18-205ENST00000428843 LY6G5CQ5SRR4 150 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 DCUN1D2Q6PH85 259 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 BNIPLQ7Z465 357 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 RNF34Q969K3 372 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 C8orf33Q9H7E9 229 aaPredicted RBP23.2■■□□□ 1.3
PTPN18-205ENST00000428843 SPHK2Q9NRA0 654 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 PIGVQ9NUD9 493 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.2■■□□□ 1.3
PTPN18-205ENST00000428843 SCINQ9Y6U3 715 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 BDP1A6H8Y1 2624 aa23.2■■□□□ 1.3
PTPN18-205ENST00000428843 ANKRD62A6NC57 917 aa23.19■■□□□ 1.3
PTPN18-205ENST00000428843 SPECC1L-ADORA2AF8WAN1 911 aa23.19■■□□□ 1.3
PTPN18-205ENST00000428843 MOCS2O96007 188 aaPredicted RBP23.19■■□□□ 1.3
PTPN18-205ENST00000428843 F9P00740 461 aa23.19■■□□□ 1.3
PTPN18-205ENST00000428843 APOEP02649 317 aa23.19■■□□□ 1.3
PTPN18-205ENST00000428843 CCR1P32246 355 aa23.19■■□□□ 1.3
PTPN18-205ENST00000428843 PTPN9P43378 593 aa23.19■■□□□ 1.3
PTPN18-205ENST00000428843 SLC11A2P49281 568 aa23.19■■□□□ 1.3
PTPN18-205ENST00000428843 ATXN1P54253 815 aaKnown RBP23.19■■□□□ 1.3
PTPN18-205ENST00000428843 VCPP55072 806 aaKnown RBP23.19■■□□□ 1.3
PTPN18-205ENST00000428843 MLLT6P55198 1093 aaPredicted RBP23.19■■□□□ 1.3
PTPN18-205ENST00000428843 PRKCQQ04759 706 aa23.19■■□□□ 1.3
PTPN18-205ENST00000428843 TMEM25Q86YD3 366 aa23.19■■□□□ 1.3
PTPN18-205ENST00000428843 FAM217AQ8IXS0 508 aa23.19■■□□□ 1.3
PTPN18-205ENST00000428843 AZIN2Q96A70 460 aa23.19■■□□□ 1.3
PTPN18-205ENST00000428843 STOML2Q9UJZ1 356 aa23.19■■□□□ 1.3
PTPN18-205ENST00000428843 SHISA7A6NL88 538 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 ACSL4O60488 711 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 ADH1CP00326 375 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 SLC2A3P11169 496 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 ADH5P11766 374 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 CTHP32929 405 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 GJA4P35212 333 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 RDXP35241 583 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms