RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 RALAP11233 206 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 ACADMP11310 421 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 CORO1AP31146 461 aaKnown RBP19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 CHKAP35790 457 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 PSEN1P49768 467 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 KIF11P52732 1056 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 FYB2Q5VWT5 728 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 IL27RAQ6UWB1 636 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 CCDC186Q7Z3E2 898 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 ANKS1BQ7Z6G8 1248 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 SLC9A9Q8IVB4 645 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 NT5C1AQ9BXI3 368 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 DCLK3Q9C098 648 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 CIPCQ9C0C6 399 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 EIF2B4Q9UI10 523 aaKnown RBP19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 NR3C1P04150 777 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 ZNF883P0CG24 379 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 COG7P83436 770 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 BNC1Q01954 994 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 INCA1Q0VD86 236 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 EFEMP1Q12805 493 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 ENPP2Q13822 863 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 ZNF234Q14588 700 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 HLA-BQ31612 363 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 CEP135Q66GS9 1140 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 FAM124AQ86V42 546 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 TMC2Q8TDI7 906 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 SNX19Q92543 992 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 CDK5RAP1Q96SZ6 601 aaKnown RBP19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 NUP58Q9BVL2 599 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 IMPG2Q9BZV3 1241 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 EXOC1Q9NV70 894 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 ELOVL2Q9NXB9 296 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 FAM13BQ9NYF5 915 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 RAXQ9Y2V3 346 aa19.22■□□□□ 0.67
UPK3BP1-201ENST00000428678 SETXQ7Z333 2677 aaKnown RBP19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 GOLGA8CPA6NN73 597 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 CYBBP04839 570 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 EPHX1P07099 455 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 CD58P19256 250 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 PRKCHP24723 683 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 STK4Q13043 487 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 E2F5Q15329 346 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 FOXD4L6Q3SYB3 417 aaPredicted RBP19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 SOWAHCQ53LP3 525 aaPredicted RBP19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 FOXD4L5Q5VV16 416 aaPredicted RBP19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 FOXD4L3Q6VB84 417 aaPredicted RBP19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 CEP57L1Q8IYX8 460 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 KIAA0895Q8NCT3 520 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 RHBDD1Q8TEB9 315 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 HNRNPLLQ8WVV9 542 aaKnown RBP19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 FOXD4L4Q8WXT5 416 aaPredicted RBP19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 SORCS1Q8WY21 1168 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 PIWIL1Q96J94 861 aaKnown RBP19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 CDC6Q99741 560 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 BACH2Q9BYV9 841 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 CLIC5Q9NZA1 410 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 KIAA1522Q9P206 1035 aaPredicted RBP19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 AGO1Q9UL18 857 aaKnown RBP19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 FRMD4BQ9Y2L6 1034 aa19.21■□□□□ 0.67
UPK3BP1-201ENST00000428678 HELZ2Q9BYK8 2649 aaKnown RBP19.21■□□□□ 0.66
UPK3BP1-201ENST00000428678 A0A1B0GVT2 93 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 IKBKBO14920 756 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 FLRT2O43155 660 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 IGLV3-19P01714 112 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 ATXN1LP0C7T5 689 aaKnown RBP19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 ME1P48163 572 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 COPAP53621 1224 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 ARID5AQ03989 594 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 EIF4HQ15056 248 aaKnown RBP19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 SERPINA13PQ6UXR4 307 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 DENND1CQ8IV53 801 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 ZNF276Q8N554 614 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 DUSP16Q9BY84 665 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 DNAI2Q9GZS0 605 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 KCTD10Q9H3F6 313 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 CYP3A43Q9HB55 503 aa19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 APOBEC3GQ9HC16 384 aaKnown RBP19.2■□□□□ 0.66
UPK3BP1-201ENST00000428678 KNTC1P50748 2209 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 PDXKO00764 312 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 KLRC4O43908 158 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 CSNK1EP49674 416 aaKnown RBP19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 AFF3P51826 1226 aaKnown RBP19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 C1orf220Q5T0J3 134 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 PPP1R26Q5T8A7 1209 aaPredicted RBP19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 RSRC2Q7L4I2 434 aaKnown RBP19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 TMPRSS7Q7RTY8 843 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 BAHD1Q8TBE0 780 aaPredicted RBP19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 DDI1Q8WTU0 396 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 TMEM174Q8WUU8 243 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 NIF3L1Q9GZT8 377 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 TOR4AQ9NXH8 423 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 MARCH2Q9P0N8 246 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 STRIP2Q9ULQ0 834 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 CLEC4EQ9ULY5 219 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 PCDHGB2Q9Y5G2 931 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 USP3Q9Y6I4 520 aa19.19■□□□□ 0.66
UPK3BP1-201ENST00000428678 SLC12A8A0AV02 714 aa19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 HLA-EP13747 358 aa19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 VAMP7P51809 220 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms