RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 TCRBV7S2A1N4TA0A589 114 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 LINC01553A4QN01 128 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 HACD1B0YJ81 288 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 PI4K2BG5E9Z4 385 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 MCF2LO15068 1137 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 FGF10O15520 208 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-209ENST00000428574 CST8O60676 142 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 IGLV3-27P01718 113 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 TFE3P19532 575 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-209ENST00000428574 CTNNB1P35222 781 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 SERPINB6P35237 376 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 PTGIRP43119 386 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 EPHB3P54753 998 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 ARPP19P56211 112 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 ZNF33AQ06730 810 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 NOMO1Q15155 1222 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 TRIP4Q15650 581 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-209ENST00000428574 ANKRD20A8PQ5CZ79 823 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 KCNT1Q5JUK3 1230 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 SPDYCQ5MJ68 293 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 NUGGCQ68CJ6 796 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 AADACL2Q6P093 401 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 LILRA6Q6PI73 481 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 ELMSAN1Q6PJG2 1045 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 TMCO3Q6UWJ1 677 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 CCNI2Q6ZMN8 369 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-209ENST00000428574 CEP128Q6ZU80 1094 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 FAM131BQ86XD5 332 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 RFX6Q8HWS3 928 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 LRRC49Q8IUZ0 686 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 KLHL7Q8IXQ5 586 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 ZDHHC14Q8IZN3 488 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 TTC9BQ8N6N2 239 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 KLHL23Q8NBE8 558 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 P3H4Q92791 437 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 PSMG2Q969U7 264 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 AZIN2Q96A70 460 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 RTP4Q96DX8 246 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 SLC39A13Q96H72 371 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 ABHD8Q96I13 439 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 CSPG4P5Q96PW8 444 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 PNKPQ96T60 521 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 EPAS1Q99814 870 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 PHACTR1Q9C0D0 580 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 LMAN2LQ9H0V9 348 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 PLEKHA4Q9H4M7 779 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 DHX35Q9H5Z1 703 aaKnown RBP9.41□□□□□ -0.9
NR1I3-209ENST00000428574 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.41□□□□□ -0.9
NR1I3-209ENST00000428574 SLC12A6Q9UHW9 1150 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 DMGDHQ9UI17 866 aaKnown RBP9.41□□□□□ -0.9
NR1I3-209ENST00000428574 ZMYM5Q9UJ78 669 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 NR2E1Q9Y466 385 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 INSL5Q9Y5Q6 135 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 V9GYY5 206 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-209ENST00000428574 BCLAF3A2AJT9 711 aaKnown RBP9.4□□□□□ -0.9
NR1I3-209ENST00000428574 KCNU1A8MYU2 1149 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 PRRG1O14668 218 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 TEX28O15482 410 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 TTI1O43156 1089 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 ADAM12O43184 909 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 MTSS1O43312 755 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 LPXNO60711 386 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 PAPLNO95428 1278 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 LATS1O95835 1130 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 APOEP02649 317 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 HMGA1P17096 107 aaKnown RBP9.4□□□□□ -0.9
NR1I3-209ENST00000428574 IL4RP24394 825 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 VSNL1P62760 191 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 TAF10Q12962 218 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 NME3Q13232 169 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 DPYSQ14117 519 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 NAA30Q147X3 362 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-209ENST00000428574 PAFAH1B3Q15102 231 aaKnown RBP9.4□□□□□ -0.9
NR1I3-209ENST00000428574 TTC27Q6P3X3 843 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 FBXO38Q6PIJ6 1188 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 TMCO2Q7Z6W1 182 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-209ENST00000428574 CDKL3Q8IVW4 592 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-209ENST00000428574 UNC45BQ8IWX7 931 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 LZTR1Q8N653 840 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 ALLCQ8N6M5 410 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 CCDC185Q8N715 623 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 PLD5Q8N7P1 536 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 ATP6V0D2Q8N8Y2 350 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 MRPL43Q8N983 215 aaKnown RBP9.4□□□□□ -0.9
NR1I3-209ENST00000428574 LEMD2Q8NC56 503 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 PCDH19Q8TAB3 1148 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 CAVIN3Q969G5 261 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 BTN2A3PQ96KV6 586 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 TGS1Q96RS0 853 aaKnown RBP9.4□□□□□ -0.9
NR1I3-209ENST00000428574 FERMT1Q9BQL6 677 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 HERPUD2Q9BSE4 406 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 HEMGNQ9BXL5 484 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 CRISPLD1Q9H336 500 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 VIPAS39Q9H9C1 493 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 NMUR1Q9HB89 426 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 CYP4F11Q9HBI6 524 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 PCDH9Q9HC56 1237 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 EPB41L5Q9HCM4 733 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 TLR9Q9NR96 1032 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 TRPM5Q9NZQ8 1165 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms