RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 LENG9Q96B70 501 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 CXorf21Q9HAI6 301 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 TUFT1Q9NNX1 390 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 ZNRF3Q9ULT6 936 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 TEX264Q9Y6I9 313 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 DOT1LQ8TEK3 1739 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-206ENST00000428313 TNFRSF10AO00220 468 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 RSL1D1O76021 490 aaKnown RBP16.57■□□□□ 0.24
C9orf3-206ENST00000428313 C1QAP02745 245 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 ALOX5P09917 674 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 HIBADHP31937 336 aaKnown RBP16.57■□□□□ 0.24
C9orf3-206ENST00000428313 IREB2P48200 963 aaKnown RBP16.57■□□□□ 0.24
C9orf3-206ENST00000428313 SLC1A6P48664 564 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 GPC3P51654 580 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 ZNF543Q08ER8 600 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 LSM12Q3MHD2 195 aaKnown RBP16.57■□□□□ 0.24
C9orf3-206ENST00000428313 AARS2Q5JTZ9 985 aaKnown RBP16.57■□□□□ 0.24
C9orf3-206ENST00000428313 ODR4Q5SWX8 454 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 BRINP3Q76B58 766 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 IGDCC3Q8IVU1 814 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 SLC15A4Q8N697 577 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 PDPRQ8NCN5 879 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 BHLHE22Q8NFJ8 381 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-206ENST00000428313 TANKQ92844 425 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 NT5C1BQ96P26 610 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 SENP7Q9BQF6 1050 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 FRMD8Q9BZ67 464 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-206ENST00000428313 SLC13A1Q9BZW2 595 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 ANLNQ9NQW6 1124 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 KCNQ5Q9NR82 932 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 USTQ9Y2C2 406 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 IFT52Q9Y366 437 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 COQ4Q9Y3A0 265 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 A0A1W2PPW3 197 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 TOM1L1O75674 476 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 XRCC1P18887 633 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-206ENST00000428313 HSD17B4P51659 736 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 THOP1P52888 689 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 KLF10Q13118 480 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 PEX6Q13608 980 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 SCARA3Q6AZY7 606 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 ZCCHC23Q6ZST2 131 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 MCF2L2Q86YR7 1114 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 PHTF2Q8N3S3 785 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 SEMA4DQ92854 862 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 VCPIP1Q96JH7 1222 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 CNDP2Q96KP4 475 aaKnown RBP16.56■□□□□ 0.24
C9orf3-206ENST00000428313 C1orf50Q9BV19 199 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 CD209Q9NNX6 404 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 KLHL11Q9NVR0 708 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 GPRC5DQ9NZD1 345 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 MINPP1Q9UNW1 487 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 ANKRD34BA5PLL1 514 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 USP17L15C9J2P7 530 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 USP17L13C9JLJ4 530 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 USP17L11C9JVI0 530 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 USP17L18D6R9N7 530 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 USP17L22D6RA61 530 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 USP17L17D6RBQ6 530 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 USP17L19D6RCP7 530 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 USP17L20D6RJB6 530 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 NCF2P19878 526 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-206ENST00000428313 RPL22P35268 128 aaKnown RBP16.56■□□□□ 0.24
C9orf3-206ENST00000428313 CDH15P55291 814 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 PSMC1P62191 440 aaKnown RBP16.56■□□□□ 0.24
C9orf3-206ENST00000428313 USP17L24Q0WX57 530 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 MAMLD1Q13495 774 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 FASTKD1Q53R41 847 aaKnown RBP16.56■□□□□ 0.24
C9orf3-206ENST00000428313 TFDP3Q5H9I0 405 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 PLEKHA7Q6IQ23 1121 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 USP17L6PQ6QN14 398 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 ENOSF1Q7L5Y1 443 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 TTC30AQ86WT1 665 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 TPH2Q8IWU9 490 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 CPA5Q8WXQ8 436 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 CCDC127Q96BQ5 260 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 CLIP3Q96DZ5 547 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 NPLQ9BXD5 320 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-206ENST00000428313 CDH19Q9H159 772 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 TMEM206Q9H813 350 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.56■□□□□ 0.24
C9orf3-206ENST00000428313 IP6K2Q9UHH9 426 aa16.56■□□□□ 0.24
C9orf3-206ENST00000428313 TCRBV7S3A2A0A539 114 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 J3QRK9 145 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 GPR25O00155 361 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 ZNF195O14628 629 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 GNL1P36915 607 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-206ENST00000428313 GABRB2P47870 512 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 ATP6V0D1P61421 351 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 GSTO1P78417 241 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 BNIP3Q12983 259 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 AGAP7PQ5VUJ5 663 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 LLGL2Q6P1M3 1020 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 ITIH5Q86UX2 942 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 KYQ8NBH2 561 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 XXYLT1Q8NBI6 393 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 FBXL8Q96CD0 374 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 COQ10BQ9H8M1 238 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 IPO11Q9UI26 975 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms