RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 GTF2A1LQ9UNN4 478 aa10□□□□□ -0.81
SNX13-203ENST00000428135 B2RBV5 119 aa10□□□□□ -0.81
SNX13-203ENST00000428135 ATP5HO75947 161 aa10□□□□□ -0.81
SNX13-203ENST00000428135 NDUFV1P49821 464 aa10□□□□□ -0.81
SNX13-203ENST00000428135 YWHAZP63104 245 aaKnown RBP10□□□□□ -0.81
SNX13-203ENST00000428135 MAPK7Q13164 816 aa10□□□□□ -0.81
SNX13-203ENST00000428135 TRADDQ15628 312 aa10□□□□□ -0.81
SNX13-203ENST00000428135 CENPPQ6IPU0 288 aa10□□□□□ -0.81
SNX13-203ENST00000428135 NPNTQ6UXI9 565 aa10□□□□□ -0.81
SNX13-203ENST00000428135 GOLGA2P5Q9HBQ8 144 aa10□□□□□ -0.81
SNX13-203ENST00000428135 NSMCE4AQ9NXX6 385 aa10□□□□□ -0.81
SNX13-203ENST00000428135 CRYL1Q9Y2S2 319 aa10□□□□□ -0.81
SNX13-203ENST00000428135 FMN2Q9NZ56 1722 aa10□□□□□ -0.81
SNX13-203ENST00000428135 XYLBO75191 536 aa10□□□□□ -0.81
SNX13-203ENST00000428135 VCLP18206 1134 aa10□□□□□ -0.81
SNX13-203ENST00000428135 MGAT1P26572 445 aa10□□□□□ -0.81
SNX13-203ENST00000428135 DMTNQ08495 405 aa10□□□□□ -0.81
SNX13-203ENST00000428135 CRHR2Q13324 411 aa10□□□□□ -0.81
SNX13-203ENST00000428135 PHKG1Q16816 387 aa10□□□□□ -0.81
SNX13-203ENST00000428135 ZC3H12AQ5D1E8 599 aaKnown RBP10□□□□□ -0.81
SNX13-203ENST00000428135 MCOLN2Q8IZK6 566 aa10□□□□□ -0.81
SNX13-203ENST00000428135 C12orf29Q8N999 325 aa10□□□□□ -0.81
SNX13-203ENST00000428135 FLCNQ8NFG4 579 aa10□□□□□ -0.81
SNX13-203ENST00000428135 ECSITQ9BQ95 431 aa10□□□□□ -0.81
SNX13-203ENST00000428135 TSEN34Q9BSV6 310 aaKnown RBP10□□□□□ -0.81
SNX13-203ENST00000428135 BPIFA1Q9NP55 256 aa10□□□□□ -0.81
SNX13-203ENST00000428135 HPSEQ9Y251 543 aa10□□□□□ -0.81
SNX13-203ENST00000428135 ARL2BPQ9Y2Y0 163 aa10□□□□□ -0.81
SNX13-203ENST00000428135 PROSCO94903 275 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 STIP1P31948 543 aaKnown RBP9.99□□□□□ -0.81
SNX13-203ENST00000428135 MMP14P50281 582 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 NUDT2P50583 147 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 CRADDP78560 199 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 CHMP1BQ7LBR1 199 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 PLEKHA8Q96JA3 519 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 EXOC2Q96KP1 924 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 ZNF558Q96NG5 402 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 RHBGQ9H310 441 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 CYP3A43Q9HB55 503 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 CRTAMO95727 393 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 TNNI3P19429 210 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 PLK1P53350 603 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 OAZ1P54368 228 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 INPP5AQ14642 412 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 GLT6D1Q7Z4J2 308 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 SYTL1Q8IYJ3 562 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 SYN2Q92777 582 aaPredicted RBP9.99□□□□□ -0.81
SNX13-203ENST00000428135 OSBPL1AQ9BXW6 950 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 ZNF556Q9HAH1 456 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 PPP1R37O75864 691 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 PIK3R5Q8WYR1 880 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 AHCYL2Q96HN2 611 aaKnown RBP9.99□□□□□ -0.81
SNX13-203ENST00000428135 PDLIM2Q96JY6 352 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 XPO6Q96QU8 1125 aaKnown RBP9.99□□□□□ -0.81
SNX13-203ENST00000428135 CCT8L2Q96SF2 557 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 ISCUQ9H1K1 167 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 PADI4Q9UM07 663 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 DYRK1BQ9Y463 629 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 RIPK3Q9Y572 518 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 NRCAMQ92823 1304 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 MEIS2O14770 477 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 POLR2EP19388 210 aaKnown RBP9.99□□□□□ -0.81
SNX13-203ENST00000428135 CES5AQ6NT32 575 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 PRUNE1Q86TP1 453 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.99□□□□□ -0.81
SNX13-203ENST00000428135 MARCH2Q9P0N8 246 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 ZMYM5Q9UJ78 669 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 MRPS23Q9Y3D9 190 aaKnown RBP9.99□□□□□ -0.81
SNX13-203ENST00000428135 ATRNO75882 1429 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 IFRD1O00458 451 aaPredicted RBP9.99□□□□□ -0.81
SNX13-203ENST00000428135 PTPN1P18031 435 aaKnown RBP9.99□□□□□ -0.81
SNX13-203ENST00000428135 TARSP26639 723 aaKnown RBP9.99□□□□□ -0.81
SNX13-203ENST00000428135 BRCC3P46736 316 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 FKBP1AP62942 108 aaKnown RBP9.99□□□□□ -0.81
SNX13-203ENST00000428135 PLOD1Q02809 727 aaPredicted RBP9.99□□□□□ -0.81
SNX13-203ENST00000428135 TP53BP2Q13625 1128 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 CNGA3Q16281 694 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 TEDDM1Q5T9Z0 273 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 ANO5Q75V66 913 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 VN1R5Q7Z5H4 357 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 ZNF410Q86VK4 478 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 APBA2Q99767 749 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 OMDQ99983 421 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 HTATIP2Q9BUP3 242 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 BLOC1S4Q9NUP1 217 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 LNPEPQ9UIQ6 1025 aa9.99□□□□□ -0.81
SNX13-203ENST00000428135 hCG_2014768A0A024R1R8 64 aa9.98□□□□□ -0.81
SNX13-203ENST00000428135 HMGCRP04035 888 aa9.98□□□□□ -0.81
SNX13-203ENST00000428135 HSPA1AP0DMV8 641 aaKnown RBP9.98□□□□□ -0.81
SNX13-203ENST00000428135 HSPA1BP0DMV9 641 aaKnown RBP9.98□□□□□ -0.81
SNX13-203ENST00000428135 ST3GAL1Q11201 340 aa9.98□□□□□ -0.81
SNX13-203ENST00000428135 NECAB2Q7Z6G3 386 aa9.98□□□□□ -0.81
SNX13-203ENST00000428135 SIX5Q8N196 739 aa9.98□□□□□ -0.81
SNX13-203ENST00000428135 FIBCD1Q8N539 461 aa9.98□□□□□ -0.81
SNX13-203ENST00000428135 USP13Q92995 863 aaPredicted RBP9.98□□□□□ -0.81
SNX13-203ENST00000428135 PPP1R2P1Q96PQ5 205 aa9.98□□□□□ -0.81
SNX13-203ENST00000428135 MRPL9Q9BYD2 267 aaKnown RBP9.98□□□□□ -0.81
SNX13-203ENST00000428135 FAM129AQ9BZQ8 928 aa9.98□□□□□ -0.81
SNX13-203ENST00000428135 LRRC40Q9H9A6 602 aa9.98□□□□□ -0.81
SNX13-203ENST00000428135 RIC8BQ9NVN3 520 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms