RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 F8VZ95 297 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 HSF2BPO75031 334 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 KAT7O95251 611 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 IGLV3-25P01717 112 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 CYBBP04839 570 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 KRT5P13647 590 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 BRD2P25440 801 aaKnown RBP9.54□□□□□ -0.88
SMC1A-203ENST00000428014 CLCN1P35523 988 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 KRT9P35527 623 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 KIR2DL1P43626 348 aaPredicted RBP9.54□□□□□ -0.88
SMC1A-203ENST00000428014 PGFP49763 221 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 MRE11P49959 708 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 DGKEP52429 567 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 JAM2P57087 298 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 YWHAZP63104 245 aaKnown RBP9.54□□□□□ -0.88
SMC1A-203ENST00000428014 IFRD2Q12894 506 aaPredicted RBP9.54□□□□□ -0.88
SMC1A-203ENST00000428014 PDCLQ13371 301 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 ENPP2Q13822 863 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 MPPE1Q53F39 396 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 FIGNQ5HY92 759 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 TOGARAM2Q6ZUX3 1019 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 RASSF3Q86WH2 238 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 BBS7Q8IWZ6 715 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMC1A-203ENST00000428014 KDM1BQ8NB78 822 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 TMEM35BQ8NCS4 154 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 NT5C3BQ969T7 300 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 SLC39A13Q96H72 371 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 SLC2A13Q96QE2 648 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 HS3ST6Q96QI5 342 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 CRACR2AQ9BSW2 395 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 GANQ9H2C0 597 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 HSD3B7Q9H2F3 369 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 FANCLQ9NW38 375 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 SMPD4Q9NXE4 827 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 MMP17Q9ULZ9 603 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 SIK3Q9Y2K2 1263 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 PAXBP1Q9Y5B6 917 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 MYO18AQ92614 2054 aaKnown RBP9.54□□□□□ -0.88
SMC1A-203ENST00000428014 K7EQS6 105 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 TULP2O00295 520 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 FOXN3O00409 490 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 PAPSS1O43252 624 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 THAP12O43422 761 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 TULP3O75386 442 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 TBX18O95935 607 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 KLKB1P03952 638 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 CYP11B1P15538 503 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 DPP6P42658 865 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 SOX9P48436 509 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 SLC11A2P49281 568 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 COPB1P53618 953 aaKnown RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 BYSLQ13895 437 aaKnown RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 DRAP1Q14919 205 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 EOGTQ5NDL2 527 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 TTC39BQ5VTQ0 682 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 FYB2Q5VWT5 728 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 KIAA0907Q7Z7F0 614 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 METTL3Q86U44 580 aaKnown RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 SUMF1Q8NBK3 374 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 ST13P5Q8NFI4 369 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 UBA3Q8TBC4 463 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 EPS8L1Q8TE68 723 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 WFIKKN2Q8TEU8 576 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 IPO4Q8TEX9 1081 aaKnown RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 DDX1Q92499 740 aaKnown RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 ZC3H10Q96K80 434 aaKnown RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 GABRG3Q99928 467 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 FBRSQ9HAH7 460 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 NPDC1Q9NQX5 325 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 ARHGEF4Q9NR80 690 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 AGO1Q9UL18 857 aaKnown RBP9.53□□□□□ -0.88
SMC1A-203ENST00000428014 SPAG17Q6Q759 2223 aa9.53□□□□□ -0.88
SMC1A-203ENST00000428014 RNF40O75150 1001 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 APBB3O95704 486 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 F9P00740 461 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 EGFP01133 1207 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 CYP1A1P04798 512 aaPredicted RBP9.52□□□□□ -0.89
SMC1A-203ENST00000428014 FYNP06241 537 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 CISD3P0C7P0 127 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 TYRP14679 529 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 CORO1AP31146 461 aaKnown RBP9.52□□□□□ -0.89
SMC1A-203ENST00000428014 GBP1P32455 592 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 NOS2P35228 1153 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 SOX5P35711 763 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 ZNF165P49910 485 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 CDR1P51861 262 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 OXCT1P55809 520 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 CSTF1Q05048 431 aaKnown RBP9.52□□□□□ -0.89
SMC1A-203ENST00000428014 EFEMP1Q12805 493 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 SLC12A1Q13621 1099 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 ARID5BQ14865 1188 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 CRY1Q16526 586 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 LAIR1Q6GTX8 287 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 OLFML1Q6UWY5 402 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 C11orf57Q6ZUT1 292 aaPredicted RBP9.52□□□□□ -0.89
SMC1A-203ENST00000428014 TMEM25Q86YD3 366 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 WDTC1Q8N5D0 677 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 UCMAQ8WVF2 138 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms