RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 ZFXP17010 805 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-204ENST00000427724 SLC12A1Q13621 1099 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 ARMC6Q6NXE6 501 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 C4orf33Q8N1A6 199 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 RNF217Q8TC41 542 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 CDK5RAP1Q96SZ6 601 aaKnown RBP10.99□□□□□ -0.65
TCOF1-204ENST00000427724 SLC9A7Q96T83 725 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 TRIM56Q9BRZ2 755 aaKnown RBP10.99□□□□□ -0.65
TCOF1-204ENST00000427724 KCTD10Q9H3F6 313 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 ACP6Q9NPH0 428 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 TUBGCP4Q9UGJ1 667 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 PLCH1Q4KWH8 1693 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 ASXL3Q9C0F0 2248 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 A0A0A6YYK5 440 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-204ENST00000427724 C3orf70A6NLC5 250 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-204ENST00000427724 PMPCBO75439 489 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 F2P00734 622 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 MAPTP10636 758 aaKnown RBP10.99□□□□□ -0.65
TCOF1-204ENST00000427724 PAMP19021 973 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 FLT3P36888 993 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 CCNHP51946 323 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-204ENST00000427724 PRR23BQ6ZRT6 265 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 KRT35Q92764 455 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 MYLPFQ96A32 169 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 RBM15Q96T37 977 aaKnown RBP eCLIP10.99□□□□□ -0.65
TCOF1-204ENST00000427724 MYOCQ99972 504 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 OSGEPL1Q9H4B0 414 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 ZFP14Q9HCL3 533 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 GPATCH2LQ9NWQ4 482 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 ZFATQ9P243 1243 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 MAFBQ9Y5Q3 323 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-204ENST00000427724 SCN11AQ9UI33 1791 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 NQO1P15559 274 aaKnown RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 ARSEP51690 589 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 SESN2P58004 480 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 YWHAZP63104 245 aaKnown RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 PDIA2Q13087 525 aaKnown RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 TRMT10CQ7L0Y3 403 aaKnown RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 SLC47A2Q86VL8 602 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 SPPL2BQ8TCT7 592 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 PRCCQ92733 491 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 TTC17Q96AE7 1141 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 DCLK3Q9C098 648 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 ATP13A1Q9HD20 1204 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 F5P12259 2224 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 ALS2Q96Q42 1657 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 SPTBN2O15020 2390 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 GOLGA8RI6L899 631 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 TSPAN1O60635 241 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 C22orf31O95567 290 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 PAPOLAP51003 745 aaKnown RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 SCNN1BP51168 640 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 CAV1Q03135 178 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 PSMD6Q15008 389 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 PDCD2Q16342 344 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 P3H1Q32P28 736 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 ARSHQ5FYA8 562 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 ANKMY2Q8IV38 441 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 NFKBIZQ9BYH8 718 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 CACNG4Q9UBN1 327 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 ARL2BPQ9Y2Y0 163 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 BTAF1O14981 1849 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 KNTC1P50748 2209 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 MYH10P35580 1976 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 CLDN5O00501 218 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 NRP1O14786 923 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 TLR5O60602 858 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 CDH16O75309 829 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 IQCF3P0C7M6 154 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 CYBAP13498 195 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 PTPN2P17706 415 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 ITIH2P19823 946 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 TNFRSF8P28908 595 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 OR1E1P30953 314 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 CHKAP35790 457 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 GATMP50440 423 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 ELF3P78545 371 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 LAMB3Q13751 1172 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 COBLL1Q53SF7 1204 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 TMTC4Q5T4D3 741 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 IPMKQ8NFU5 416 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 OR5B17Q8NGF7 314 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 KAT5Q92993 513 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 ZBED3Q96IU2 234 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 SPATA17Q96L03 361 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 TRAIPQ9BWF2 469 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 FAM129AQ9BZQ8 928 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 DHX33Q9H6R0 707 aaKnown RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 TBC1D13Q9NVG8 400 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 CDH9Q9ULB4 789 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 COL1A1P02452 1464 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 ZMYM2Q9UBW7 1377 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 GTPBP10A4D1E9 387 aaKnown RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 FGF18O76093 207 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 SHBGP04278 402 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 RPL21P46778 160 aaKnown RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 SERPINB4P48594 390 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 GSCP56915 257 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-204ENST00000427724 FAM228AQ86W67 206 aa10.98□□□□□ -0.65
TCOF1-204ENST00000427724 LNX1Q8TBB1 728 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms