RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 IFNA16P05015 189 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 ITGALP20701 1170 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 HDAC4P56524 1084 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 CRADDP78560 199 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 INSCQ1MX18 579 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 NLRP9Q7RTR0 991 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 TEX9Q8N6V9 391 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 PRPF18Q99633 342 aaKnown RBP13.52□□□□□ -0.25
SPG11-202ENST00000427534 UBXN6Q9BZV1 441 aa13.52□□□□□ -0.25
SPG11-202ENST00000427534 SPATS2LQ9NUQ6 558 aaKnown RBP13.52□□□□□ -0.25
SPG11-202ENST00000427534 RIMS1Q86UR5 1692 aaKnown RBP13.51□□□□□ -0.25
SPG11-202ENST00000427534 HOXA2O43364 376 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 PPP1R37O75864 691 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 VDRP11473 427 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 TOB1P50616 345 aaPredicted RBP13.51□□□□□ -0.25
SPG11-202ENST00000427534 SEC24CP53992 1094 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 RAP1GAP2Q684P5 730 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 FBXL19Q6PCT2 694 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 ANKS1AQ92625 1134 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 RIC8BQ9NVN3 520 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 CCL16O15467 120 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 TSC22D2O75157 780 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 LHX1P48742 406 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 PFKPQ01813 784 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 SETMARQ53H47 684 aaPredicted RBP13.51□□□□□ -0.25
SPG11-202ENST00000427534 USP38Q8NB14 1042 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 TRPM4Q8TD43 1214 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 XPO6Q96QU8 1125 aaKnown RBP13.51□□□□□ -0.25
SPG11-202ENST00000427534 CDY2AQ9Y6F7 541 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 SLC2A3P11169 496 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 PYGMP11217 842 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 GEMIN4P57678 1058 aaKnown RBP13.51□□□□□ -0.25
SPG11-202ENST00000427534 OLFML2BQ68BL8 750 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 BTN2A1Q7KYR7 527 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 KIAA2013Q8IYS2 634 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 ZNF473Q8WTR7 871 aaKnown RBP13.51□□□□□ -0.25
SPG11-202ENST00000427534 MARK4Q96L34 752 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 RNPEPQ9H4A4 650 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 MRPS15P82914 257 aaKnown RBP13.51□□□□□ -0.25
SPG11-202ENST00000427534 CYP24A1Q07973 514 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 POMGNT2Q8NAT1 580 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 VPS37AQ8NEZ2 397 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 MRPL17Q9NRX2 175 aaKnown RBP13.51□□□□□ -0.25
SPG11-202ENST00000427534 STOML1Q9UBI4 398 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 RASSF10A6NK89 507 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 KCNK1O00180 336 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 CLDN5O00501 218 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 IRF6O14896 467 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 FLT3P36888 993 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 TRIP10Q15642 601 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 AGAP9Q5VTM2 703 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 CES5AQ6NT32 575 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 ZNF677Q86XU0 584 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 ASZ1Q8WWH4 475 aa13.51□□□□□ -0.25
SPG11-202ENST00000427534 SAE1Q9UBE0 346 aaPredicted RBP13.51□□□□□ -0.25
SPG11-202ENST00000427534 IL1BP01584 269 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 HLA-DQA2P01906 255 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 PIRTP0C851 137 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 NOS3P29474 1203 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 MAP3K10Q02779 954 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 TRADDQ15628 312 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 C16orf89Q6UX73 402 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 ADGRE3Q9BY15 652 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 CCR1P32246 355 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 NCKAP1LP55160 1127 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 SEC23AQ15436 765 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 HLA-DQA1Q5Y7H0 255 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 CYP20A1Q6UW02 462 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 LINC00523Q86TU6 105 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 REPS2Q8NFH8 660 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 FIG4Q92562 907 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 IMPAD1Q9NX62 359 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 NDRG2Q9UN36 371 aaKnown RBP13.5□□□□□ -0.25
SPG11-202ENST00000427534 SMG5Q9UPR3 1016 aaKnown RBP13.5□□□□□ -0.25
SPG11-202ENST00000427534 HPSEQ9Y251 543 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 MEGF6O75095 1541 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 SMIM22K7EJ46 135 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 ZNF23P17027 643 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 METTL7BQ6UX53 244 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 PTF1AQ7RTS3 328 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 TPCN2Q8NHX9 752 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 KRT35Q92764 455 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 TKTL2Q9H0I9 626 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 RANBP17Q9H2T7 1088 aaKnown RBP13.5□□□□□ -0.25
SPG11-202ENST00000427534 SEMA6BQ9H3T3 888 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 ACTR8Q9H981 624 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 ALKBH4Q9NXW9 302 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 POLR1DQ9Y2S0 133 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 TRAF2Q12933 501 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 NFYCQ13952 458 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 MIIPQ5JXC2 388 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 DAB2IPQ5VWQ8 1189 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 NPNTQ6UXI9 565 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.5□□□□□ -0.25
SPG11-202ENST00000427534 ZC3H15Q8WU90 426 aaKnown RBP13.5□□□□□ -0.25
SPG11-202ENST00000427534 ZIM3Q96PE6 472 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 ARHGEF9O43307 516 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 CDH16O75309 829 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 CTPS1P17812 591 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 PCYOX1LQ8NBM8 494 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms