RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 WDR27A2RRH5 827 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 CFAP69A5D8W1 941 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 APOEP02649 317 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 DHRS4L1P0CG22 281 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 HOXD8P13378 290 aaPredicted RBP12.02□□□□□ -0.49
FIRRE-201ENST00000427391 SERPINB3P29508 390 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 ALDH3A1P30838 453 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 SESN2P58004 480 aaPredicted RBP12.02□□□□□ -0.49
FIRRE-201ENST00000427391 SLC18A2Q05940 514 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 CCDC15Q0P6D6 951 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 UBXN11Q5T124 520 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 WLSQ5T9L3 541 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 OTUD1Q5VV17 481 aaPredicted RBP12.02□□□□□ -0.49
FIRRE-201ENST00000427391 FYB2Q5VWT5 728 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 ARHGAP17Q68EM7 881 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 CASC4Q6P4E1 433 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 ZCCHC23Q6ZST2 131 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 PLEKHH3Q7Z736 793 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 CLNKQ7Z7G1 428 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 ADGRF2Q8IZF7 708 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 RNF169Q8NCN4 708 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
FIRRE-201ENST00000427391 TBC1D10AQ9BXI6 508 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 KCNK13Q9HB14 408 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 ARL8BQ9NVJ2 186 aa12.02□□□□□ -0.49
FIRRE-201ENST00000427391 NKX1-2Q9UD57 310 aaPredicted RBP12.02□□□□□ -0.49
FIRRE-201ENST00000427391 UBQLN1Q9UMX0 589 aaKnown RBP12.02□□□□□ -0.49
FIRRE-201ENST00000427391 MAGED2Q9UNF1 606 aaPredicted RBP12.02□□□□□ -0.49
FIRRE-201ENST00000427391 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.01□□□□□ -0.49
FIRRE-201ENST00000427391 FAM237BA0A1B0GVD1 139 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 RFPL1O75677 317 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 SETSIPP0DME0 302 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 KITP10721 976 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 ALADP13716 330 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 PTPN9P43378 593 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 GTF2A2P52657 109 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 KIAA0319Q5VV43 1072 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 WSCD1Q658N2 575 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 PDCD7Q8N8D1 485 aaKnown RBP12.01□□□□□ -0.49
FIRRE-201ENST00000427391 APPL2Q8NEU8 664 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 CENPIQ92674 756 aaPredicted RBP12.01□□□□□ -0.49
FIRRE-201ENST00000427391 VPS11Q9H270 941 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 TXLNGQ9NUQ3 528 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.01□□□□□ -0.49
FIRRE-201ENST00000427391 ARMCX1Q9P291 453 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 SMAPO00193 183 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 DCTN3O75935 186 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 ANP32DO95626 131 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 F2P00734 622 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 MYL3P08590 195 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 TROVE2P10155 538 aaKnown RBP eCLIP12.01□□□□□ -0.49
FIRRE-201ENST00000427391 RARBP10826 455 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 LILRA4P59901 499 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 AP1B1Q10567 949 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 RIPK1Q13546 671 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 MFSD10Q14728 455 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 TTC39BQ5VTQ0 682 aaPredicted RBP12.01□□□□□ -0.49
FIRRE-201ENST00000427391 HEATR6Q6AI08 1181 aaKnown RBP12.01□□□□□ -0.49
FIRRE-201ENST00000427391 TLK2Q86UE8 772 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 LONP2Q86WA8 852 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 UNC93AQ86WB7 457 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 CDKL3Q8IVW4 592 aaPredicted RBP12.01□□□□□ -0.49
FIRRE-201ENST00000427391 TMEM120AQ9BXJ8 343 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 ARHGEF4Q9NR80 690 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 MORF4L1Q9UBU8 362 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 IPPQ9Y573 584 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 USP3Q9Y6I4 520 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 HTTP42858 3142 aa12.01□□□□□ -0.49
FIRRE-201ENST00000427391 FAM72CH0Y354 149 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 C2CD2LO14523 706 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 SNRPAP09012 282 aaKnown RBP12□□□□□ -0.49
FIRRE-201ENST00000427391 EZRP15311 586 aaKnown RBP12□□□□□ -0.49
FIRRE-201ENST00000427391 YY1P25490 414 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 PRKD1Q15139 912 aaPredicted RBP12□□□□□ -0.49
FIRRE-201ENST00000427391 CTC1Q2NKJ3 1217 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 FAM72AQ5TYM5 149 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 FAM72DQ6L9T8 149 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 C16orf46Q6P387 395 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 PAQR9Q6ZVX9 377 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 FAM72BQ86X60 149 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 CRYBG2Q8N1P7 616 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12□□□□□ -0.49
FIRRE-201ENST00000427391 B3GALNT2Q8NCR0 500 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 SMG8Q8ND04 991 aaKnown RBP12□□□□□ -0.49
FIRRE-201ENST00000427391 CCNYQ8ND76 341 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 DEPDC1BQ8WUY9 529 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 ALKBH8Q96BT7 664 aaKnown RBP12□□□□□ -0.49
FIRRE-201ENST00000427391 QKIQ96PU8 341 aaKnown RBP eCLIP12□□□□□ -0.491e-6■■□□□ 14.1
FIRRE-201ENST00000427391 MIPEPQ99797 713 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 C20orf27Q9GZN8 174 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 IQCGQ9H095 443 aaKnown RBP12□□□□□ -0.49
FIRRE-201ENST00000427391 LRMDAQ9H2I8 198 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 ANLNQ9NQW6 1124 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 TMEM30AQ9NV96 361 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 DERAQ9Y315 318 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 NUP205Q92621 2012 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 RRN3P2A6NIE6 340 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 KCNK1O00180 336 aa12□□□□□ -0.49
FIRRE-201ENST00000427391 NRP1O14786 923 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms