RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 IZUMO2Q6UXV1 221 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 CATSPER4Q7RTX7 472 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 CCNJLQ8IV13 435 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 CCNYL1Q8N7R7 359 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 MCUQ8NE86 351 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 EXT2Q93063 718 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.83□□□□□ -0.19
USP42-203ENST00000426246 PPME1Q9Y570 386 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 SNRPAP09012 282 aaKnown RBP13.83□□□□□ -0.2
USP42-203ENST00000426246 SERPINB5P36952 375 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 TMEM132DQ14C87 1099 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 OASLQ15646 514 aaKnown RBP13.83□□□□□ -0.2
USP42-203ENST00000426246 MORN1Q5T089 497 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 PPP1R26Q5T8A7 1209 aaPredicted RBP13.83□□□□□ -0.2
USP42-203ENST00000426246 KCNT2Q6UVM3 1135 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 CEP128Q6ZU80 1094 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 C18orf25Q96B23 403 aaPredicted RBP13.83□□□□□ -0.2
USP42-203ENST00000426246 ZFATQ9P243 1243 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 PLA2G4CQ9UP65 541 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 CNTNAP2Q9UHC6 1331 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 FAM155AB1AL88 458 aaPredicted RBP13.83□□□□□ -0.2
USP42-203ENST00000426246 C6orf222P0C671 652 aaPredicted RBP13.83□□□□□ -0.2
USP42-203ENST00000426246 CSH1P0DML2 217 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 CSH2P0DML3 217 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 ITGA9Q13797 1035 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 RALGPS1Q5JS13 557 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 CDCA2Q69YH5 1023 aaPredicted RBP13.83□□□□□ -0.2
USP42-203ENST00000426246 WDR49Q8IV35 697 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 TP53INP2Q8IXH6 220 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 TTC13Q8NBP0 860 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 BTBD10Q9BSF8 475 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 SNTG2Q9NY99 539 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 KLHL8Q9P2G9 620 aaPredicted RBP13.83□□□□□ -0.2
USP42-203ENST00000426246 NUDT5Q9UKK9 219 aa13.83□□□□□ -0.2
USP42-203ENST00000426246 TBX10O75333 385 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 METTL18O95568 372 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 RARBP10826 455 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 GNAT1P11488 350 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 ADCYAP1R1P41586 468 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 CLDN10P78369 228 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 GALNTL6Q49A17 601 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 PMF1Q6P1K2 205 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 MPZL3Q6UWV2 235 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 FAM167AQ96KS9 214 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 ACSS3Q9H6R3 686 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 SLC5A4Q9NY91 659 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 SCOCQ9UIL1 159 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 FAM189A1O60320 539 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 SRGAP2BP0DMP2 458 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 HOXD8P13378 290 aaPredicted RBP13.82□□□□□ -0.2
USP42-203ENST00000426246 MGAT1P26572 445 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 NEK3P51956 506 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 SARNPP82979 210 aaKnown RBP13.82□□□□□ -0.2
USP42-203ENST00000426246 PTP4A2Q12974 167 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 BIRC2Q13490 618 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 TFDP2Q14188 446 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 XYLT1Q86Y38 959 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 RBM15BQ8NDT2 890 aaKnown RBP13.82□□□□□ -0.2
USP42-203ENST00000426246 PPTC7Q8NI37 304 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 TEKT4Q8WW24 435 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 USP13Q92995 863 aaPredicted RBP13.82□□□□□ -0.2
USP42-203ENST00000426246 SNRNP25Q9BV90 132 aaKnown RBP13.82□□□□□ -0.2
USP42-203ENST00000426246 DPEP3Q9H4B8 488 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 PNPOQ9NVS9 261 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 TSR3Q9UJK0 312 aaKnown RBP13.82□□□□□ -0.2
USP42-203ENST00000426246 ANK1P16157 1881 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 BHMG1C9JSJ3 638 aaPredicted RBP13.82□□□□□ -0.2
USP42-203ENST00000426246 CLDN5O00501 218 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 GSC2O15499 205 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 KRT38O76015 456 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 PROCP04070 461 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 IQCF3P0C7M6 154 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 SKIP12755 728 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 ARL1P40616 181 aaPredicted RBP13.82□□□□□ -0.2
USP42-203ENST00000426246 DLG2Q15700 870 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 N4BP2L1Q5TBK1 243 aaPredicted RBP13.82□□□□□ -0.2
USP42-203ENST00000426246 LPCAT4Q643R3 524 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 PLEKHH3Q7Z736 793 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 GALNT4Q8N4A0 578 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 C16orf70Q9BSU1 422 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 RSAD1Q9HA92 442 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 ETNK2Q9NVF9 386 aa13.82□□□□□ -0.2
USP42-203ENST00000426246 DCXO43602 365 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 MSCO60682 206 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 AP1G2O75843 785 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 ATP6V1B1P15313 513 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 GOT1P17174 413 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 SLC26A2P50443 739 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 RWDD4Q6NW29 188 aaKnown RBP13.81□□□□□ -0.2
USP42-203ENST00000426246 LAYNQ6UX15 382 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 LINC01465Q8N7H1 131 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 AFG1LQ8WV93 481 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 CELF6Q96J87 481 aaKnown RBP13.81□□□□□ -0.2
USP42-203ENST00000426246 TMEM134Q9H6X4 195 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 SPATS2LQ9NUQ6 558 aaKnown RBP13.81□□□□□ -0.2
USP42-203ENST00000426246 SENP1Q9P0U3 644 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 PRKAG3Q9UGI9 489 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 CPA4Q9UI42 421 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 SIGLEC16A6NMB1 481 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 TRUB2O95900 331 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms