RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 C4orf22Q6V702 233 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 HOOK3Q86VS8 718 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 TMEM173Q86WV6 379 aaPredicted RBP14.94□□□□□ -0.02
CDK3-201ENST00000425876 ARHGAP18Q8N392 663 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 DQX1Q8TE96 717 aaKnown RBP14.94□□□□□ -0.02
CDK3-201ENST00000425876 BCL7CQ8WUZ0 217 aaPredicted RBP14.94□□□□□ -0.02
CDK3-201ENST00000425876 RIN2Q8WYP3 895 aaPredicted RBP14.94□□□□□ -0.02
CDK3-201ENST00000425876 EDEM1Q92611 657 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 ZNF689Q96CS4 500 aaPredicted RBP14.94□□□□□ -0.02
CDK3-201ENST00000425876 SPATA17Q96L03 361 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 CEP295NLQ96MC4 621 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 PHACTR1Q9C0D0 580 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 USP29Q9HBJ7 922 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 ARHGEF4Q9NR80 690 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.94□□□□□ -0.021e-19■■■■□ 24.2
CDK3-201ENST00000425876 LTBP2Q14767 1821 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 SYNJ2BP-COX16A0A087WUM0 186 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 MTMR11A4FU01 709 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 HACD1B0YJ81 288 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 NT5C1B-RDH14C9J2C7 533 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 UPP2O95045 317 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 AMHP03971 560 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 GOT1P17174 413 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 RPL22P35268 128 aaKnown RBP14.94□□□□□ -0.02
CDK3-201ENST00000425876 GDF10P55107 478 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 DPYSQ14117 519 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 BRMS1LQ5PSV4 323 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 RNASEH2BQ5TBB1 312 aaKnown RBP14.94□□□□□ -0.02
CDK3-201ENST00000425876 BTBD8Q5XKL5 378 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 DENND2CQ68D51 928 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 NCBP2-AS2Q69YL0 99 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 SCD5Q86SK9 330 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 CROCCP2Q86T23 111 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 PRUNE1Q86TP1 453 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 TAC4Q86UU9 113 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 CDKL3Q8IVW4 592 aaPredicted RBP14.94□□□□□ -0.02
CDK3-201ENST00000425876 PYROXD2Q8N2H3 581 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 FAM71DQ8N9W8 422 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 IGSF21Q96ID5 467 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 SEMA4AQ9H3S1 761 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 SMOC2Q9H3U7 446 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 WDCPQ9H6R7 721 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 RC3H2Q9HBD1 1191 aaKnown RBP14.94□□□□□ -0.02
CDK3-201ENST00000425876 COX16Q9P0S2 106 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 FARP1Q9Y4F1 1045 aaPredicted RBP14.94□□□□□ -0.02
CDK3-201ENST00000425876 HEY1Q9Y5J3 304 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 BACE2Q9Y5Z0 518 aa14.94□□□□□ -0.02
CDK3-201ENST00000425876 ALPK3Q96L96 1907 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 POLR3GO15318 223 aaPredicted RBP14.93□□□□□ -0.02
CDK3-201ENST00000425876 IRAK2O43187 625 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 RIPK2O43353 540 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 RTN3O95197 1032 aaPredicted RBP14.93□□□□□ -0.02
CDK3-201ENST00000425876 CPB1P15086 417 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 AMPD1P23109 780 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 CHKAP35790 457 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 GABPB1Q06547 395 aaPredicted RBP14.93□□□□□ -0.02
CDK3-201ENST00000425876 PAFAH1B3Q15102 231 aaKnown RBP14.93□□□□□ -0.02
CDK3-201ENST00000425876 SLC8B1Q6J4K2 584 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 MFSD5Q6N075 450 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 MSANTD2Q6P1R3 559 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 TAS1R1Q7RTX1 841 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 ZC3H18Q86VM9 953 aaKnown RBP14.93□□□□□ -0.02
CDK3-201ENST00000425876 ATAD1Q8NBU5 361 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 ADAM32Q8TC27 787 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 OLFM3Q96PB7 478 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 TMEM109Q9BVC6 243 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 MAGEB5Q9BZ81 275 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 OSBPL2Q9H1P3 480 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 PAK5Q9P286 719 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 MTRRQ9UBK8 725 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 RAD54BQ9Y620 910 aa14.93□□□□□ -0.02
CDK3-201ENST00000425876 COL4A6Q14031 1691 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 PDE4DIPQ5VU43 2346 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 TRIM43BA6NCK2 446 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 GOLGA6L10A6NI86 522 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 EEF2KO00418 725 aaKnown RBP14.92□□□□□ -0.02
CDK3-201ENST00000425876 BAIAP3O94812 1187 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 HAPLN1P10915 354 aaPredicted RBP14.92□□□□□ -0.02
CDK3-201ENST00000425876 HTR7P34969 479 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 ACTN2P35609 894 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 PBX3P40426 434 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 PSEN1P49768 467 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 RPL10AP62906 217 aaKnown RBP14.92□□□□□ -0.02
CDK3-201ENST00000425876 GBE1Q04446 702 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 ZNF844Q08AG5 666 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 SLC10A2Q12908 348 aaPredicted RBP14.92□□□□□ -0.02
CDK3-201ENST00000425876 DDR2Q16832 855 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 SLC45A4Q5BKX6 768 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 CEP85LQ5SZL2 805 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 RSPO2Q6UXX9 243 aaPredicted RBP14.92□□□□□ -0.02
CDK3-201ENST00000425876 RFX8Q6ZV50 586 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 CCDC25Q86WR0 208 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 PPIL6Q8IXY8 311 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 CMTR2Q8IYT2 770 aaKnown RBP14.92□□□□□ -0.02
CDK3-201ENST00000425876 TMEM199Q8N511 208 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 TRIM43Q96BQ3 446 aaPredicted RBP14.92□□□□□ -0.02
CDK3-201ENST00000425876 B3GALT6Q96L58 329 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 PGLYRP2Q96PD5 576 aa14.92□□□□□ -0.02
CDK3-201ENST00000425876 QKIQ96PU8 341 aaKnown RBP eCLIP14.92□□□□□ -0.02
CDK3-201ENST00000425876 TMBIM4Q9HC24 238 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms