RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 FBXO22Q8NEZ5 403 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 CEP295NLQ96MC4 621 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 CRISPLD1Q9H336 500 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 ARHGEF4Q9NR80 690 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 AAASQ9NRG9 546 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 TMPRSS4Q9NRS4 437 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 COX16Q9P0S2 106 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 LAMA2P24043 3122 aaKnown RBP15.75■□□□□ 0.11
ACTB-204ENST00000425660 BCLAF3A2AJT9 711 aaKnown RBP15.75■□□□□ 0.11
ACTB-204ENST00000425660 H0YGN5 161 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 H3BRJ5 948 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 DNALI1O14645 258 aaPredicted RBP15.75■□□□□ 0.11
ACTB-204ENST00000425660 IRAK2O43187 625 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 SOD2P04179 222 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 HAPLN1P10915 354 aaPredicted RBP15.75■□□□□ 0.11
ACTB-204ENST00000425660 ETS1P14921 441 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 VPS41P49754 854 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 PGFP49763 221 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 DPYSQ14117 519 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 HSP90B2PQ58FF3 399 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 IZUMO3Q5VZ72 239 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 BTBD8Q5XKL5 378 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 C1orf228Q6PIY5 440 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 PRSS55Q6UWB4 352 aaPredicted RBP15.75■□□□□ 0.11
ACTB-204ENST00000425660 LRIG3Q6UXM1 1119 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 DENND5BQ6ZUT9 1274 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 RELL1Q8IUW5 271 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 UNC45BQ8IWX7 931 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 SLC39A11Q8N1S5 342 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 ARHGAP18Q8N392 663 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 RSAD2Q8WXG1 361 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 FOXP3Q9BZS1 431 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 EPB41L4BQ9H329 900 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 PABPC3Q9H361 631 aaKnown RBP15.75■□□□□ 0.11
ACTB-204ENST00000425660 WDCPQ9H6R7 721 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 NMUR1Q9HB89 426 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 USP29Q9HBJ7 922 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 COMMD8Q9NX08 183 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 ANAPC5Q9UJX4 755 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 ATP8A1Q9Y2Q0 1164 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 NFS1Q9Y697 457 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 CDY1Q9Y6F8 540 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 CFAP69A5D8W1 941 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 IFNB1P01574 187 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 OAS2P29728 719 aaKnown RBP15.75■□□□□ 0.11
ACTB-204ENST00000425660 PMS2P54278 862 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 USP46P62068 366 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 GBE1Q04446 702 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 GPS1Q13098 491 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 MORF4L2Q15014 288 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 ZC3H18Q86VM9 953 aaKnown RBP15.75■□□□□ 0.11
ACTB-204ENST00000425660 ZNF558Q96NG5 402 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 OLFM3Q96PB7 478 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 IL23AQ9NPF7 189 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 ARHGEF38Q9NXL2 777 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 TPX2Q9ULW0 747 aaKnown RBP15.75■□□□□ 0.11
ACTB-204ENST00000425660 HEY1Q9Y5J3 304 aa15.75■□□□□ 0.11
ACTB-204ENST00000425660 PLXNA3P51805 1871 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 WDR27A2RRH5 827 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 RTN3O95197 1032 aaPredicted RBP15.74■□□□□ 0.11
ACTB-204ENST00000425660 LAG3P18627 525 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 ARPP19P56211 112 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 DSG1Q02413 1049 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 IFRD2Q12894 506 aaPredicted RBP15.74■□□□□ 0.11
ACTB-204ENST00000425660 SLC10A2Q12908 348 aaPredicted RBP15.74■□□□□ 0.11
ACTB-204ENST00000425660 BTG3Q14201 252 aaPredicted RBP15.74■□□□□ 0.11
ACTB-204ENST00000425660 PSMD5Q16401 504 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 BRMS1LQ5PSV4 323 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 RNASEH2BQ5TBB1 312 aaKnown RBP15.74■□□□□ 0.11
ACTB-204ENST00000425660 SDHAF4Q5VUM1 108 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 MSANTD2Q6P1R3 559 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 DARS2Q6PI48 645 aaKnown RBP15.74■□□□□ 0.11
ACTB-204ENST00000425660 RFX8Q6ZV50 586 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 BZW1Q7L1Q6 419 aaKnown RBP15.74■□□□□ 0.11
ACTB-204ENST00000425660 TMCO2Q7Z6W1 182 aaPredicted RBP15.74■□□□□ 0.11
ACTB-204ENST00000425660 FAM71DQ8N9W8 422 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 RIN2Q8WYP3 895 aaPredicted RBP15.74■□□□□ 0.11
ACTB-204ENST00000425660 PKNOX2Q96KN3 472 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 TKTL2Q9H0I9 626 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 C10orf88Q9H8K7 445 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 OSER1Q9NX31 292 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 CLIC5Q9NZA1 410 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 DTLQ9NZJ0 730 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 HSFX1Q9UBD0 423 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 SHOC2Q9UQ13 582 aa15.74■□□□□ 0.11
ACTB-204ENST00000425660 FARP1Q9Y4F1 1045 aaPredicted RBP15.74■□□□□ 0.11
ACTB-204ENST00000425660 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.73■□□□□ 0.11
ACTB-204ENST00000425660 A0A1W2PQH9 124 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 FAM72CH0Y354 149 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 DCLK1O15075 740 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 ADAM12O43184 909 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 OPA1O60313 960 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 NUDT17P0C025 328 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 AMPD1P23109 780 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 RPL22P35268 128 aaKnown RBP15.73■□□□□ 0.11
ACTB-204ENST00000425660 RPL10AP62906 217 aaKnown RBP15.73■□□□□ 0.11
ACTB-204ENST00000425660 DUSP4Q13115 394 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 PAFAH1B3Q15102 231 aaKnown RBP15.73■□□□□ 0.11
ACTB-204ENST00000425660 MGAT5BQ3V5L5 792 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 FAM72AQ5TYM5 149 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms