RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 GTF2A2P52657 109 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 SP4Q02446 784 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 CD300CQ08708 224 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 WASHC5Q12768 1159 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 USP41Q3LFD5 358 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 DNAJC24Q6P3W2 148 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 AAGABQ6PD74 315 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 TNS4Q8IZW8 715 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 PDIK1LQ8N165 341 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 FBXW8Q8N3Y1 598 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 RILPQ96NA2 401 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 RAVER2Q9HCJ3 691 aaKnown RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 SLC9A2Q9UBY0 812 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 LAMA2P24043 3122 aaKnown RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 FAM159BA6NKW6 160 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 PEX1O43933 1283 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 CDH5P33151 784 aaPredicted RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 CRHR1P34998 444 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 THOP1P52888 689 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 TREML2Q5T2D2 321 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 PTAR1Q7Z6K3 402 aaPredicted RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 CEP170P1Q96L14 293 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 CNBD2Q96M20 576 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 RAB6BQ9NRW1 208 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 TMEM216Q9P0N5 145 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 TXNDC9O14530 226 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 TRUB2O95900 331 aaKnown RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 MYCLP12524 364 aaPredicted RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 GARTP22102 1010 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 ATXN1P54253 815 aaKnown RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 SNRPFP62306 86 aaKnown RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 STX3Q13277 289 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 CEACAM7Q14002 265 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 ST13P4Q8IZP2 240 aaPredicted RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 CPXCR1Q8N123 301 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 PPP1R36Q96LQ0 422 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 PTTG2Q9NZH5 202 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 PGAP2Q9UHJ9 254 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 AGO2Q9UKV8 859 aaKnown RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 APOC4-APOC2K7ER74 178 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 ASS1P00966 412 aaKnown RBP13.32□□□□□ -0.28
TOP2B-203ENST00000424225 APOC2P02655 101 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 PSMA2P25787 234 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 CBLBQ13191 982 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 NOMO1Q15155 1222 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 ZNF781Q8N8C0 355 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 RSAD2Q8WXG1 361 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 LENG8Q96PV6 779 aaPredicted RBP13.32□□□□□ -0.28
TOP2B-203ENST00000424225 RANBP9Q96S59 729 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 PPCSQ9HAB8 311 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 RAD17O75943 681 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 SLC1A6P48664 564 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 SWSAP1Q6NVH7 229 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 DCUN1D2Q6PH85 259 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 SDCCAG8Q86SQ7 713 aaPredicted RBP13.32□□□□□ -0.28
TOP2B-203ENST00000424225 TMEM102Q8N9M5 508 aaPredicted RBP13.32□□□□□ -0.28
TOP2B-203ENST00000424225 PRPF18Q99633 342 aaKnown RBP13.32□□□□□ -0.28
TOP2B-203ENST00000424225 POLR3FQ9H1D9 316 aaPredicted RBP13.32□□□□□ -0.28
TOP2B-203ENST00000424225 ARHGEF38Q9NXL2 777 aa13.32□□□□□ -0.28
TOP2B-203ENST00000424225 PEX10O60683 326 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 TOM1L1O75674 476 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 HMGCRP04035 888 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 ABCG1P45844 678 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 TGFB2P61812 414 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 MRPS22P82650 360 aaKnown RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 ZNF423Q2M1K9 1284 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 TMEM198Q66K66 360 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 PIWIL2Q8TC59 973 aaKnown RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 AGR3Q8TD06 166 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 PPP4R1Q8TF05 950 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 TMEM39BQ9GZU3 492 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 WWP1Q9H0M0 922 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 MKS1Q9NXB0 559 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 MOCS1Q9NZB8 636 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 ZC3H7BQ9UGR2 993 aaKnown RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 CCPG1Q9ULG6 757 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 MAD1L1Q9Y6D9 718 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 CROCCQ5TZA2 2017 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 E9PBE3 544 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 TPP1O14773 563 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 KLHL41O60662 606 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 GRAP2O75791 330 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 SNRPAP09012 282 aaKnown RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 KCNA2P16389 499 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 TPP2P29144 1249 aaPredicted RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 DNAL1Q4LDG9 190 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 N4BP2L1Q5TBK1 243 aaPredicted RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 CDR2LQ86X02 465 aaPredicted RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 KHSRPQ92945 711 aaKnown RBP eCLIP13.31□□□□□ -0.287e-7■■□□□ 14
TOP2B-203ENST00000424225 SLC35B4Q969S0 331 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 AP4B1Q9Y6B7 739 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 RNASEH2AO75792 299 aaKnown RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 ICAM1P05362 532 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 P4HA1P13674 534 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 ALOX15P16050 662 aaPredicted RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 ZNF26P17031 533 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms