RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 RRN3Q9NYV6 651 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 TAS2R14Q9NYV8 317 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 MARK1Q9P0L2 795 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 ZNF318Q5VUA4 2279 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 KIAA1549LQ6ZVL6 1849 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 CAPN9O14815 690 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 HOXC11O43248 304 aaPredicted RBP19.23■□□□□ 0.67
HDAC6-205ENST00000423941 GRAP2O75791 330 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 HMBSP08397 361 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 TARSP26639 723 aaKnown RBP19.23■□□□□ 0.67
HDAC6-205ENST00000423941 AVPR2P30518 371 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 OPRD1P41143 372 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 EIF2DP41214 584 aaKnown RBP19.23■□□□□ 0.67
HDAC6-205ENST00000423941 AMPD2Q01433 879 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 TMEM196Q5HYL7 178 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 LY6G5CQ5SRR4 150 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 OTUD1Q5VV17 481 aaPredicted RBP19.23■□□□□ 0.67
HDAC6-205ENST00000423941 TMEM25Q86YD3 366 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 UNC45BQ8IWX7 931 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 ETFBKMTQ8IXQ9 262 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 CCDC105Q8IYK2 499 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 MCOLN2Q8IZK6 566 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 OR8K1Q8NGG5 319 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 P2RY11Q96G91 374 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 C11orf70Q9BRQ4 267 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 ADAM33Q9BZ11 813 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 FOXQ1Q9C009 403 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 ISCUQ9H1K1 167 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 MFSD1Q9H3U5 465 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 ADAM22Q9P0K1 906 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 ARHGAP20Q9P2F6 1191 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 MRPS17Q9Y2R5 130 aaKnown RBP19.23■□□□□ 0.67
HDAC6-205ENST00000423941 SIT1Q9Y3P8 196 aa19.23■□□□□ 0.67
HDAC6-205ENST00000423941 A0A0A0MRY4 1105 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 FAM170BA6NMN3 283 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 ENDOD1O94919 500 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 CALB1P05937 261 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 CHRNB1P11230 501 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 CHKAP35790 457 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 FLT3P36888 993 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 HARS2P49590 506 aaKnown RBP19.22■□□□□ 0.67
HDAC6-205ENST00000423941 ZNF75DP51815 510 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 TBX4P57082 545 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 CDK17Q00537 523 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 FAM102AQ5T9C2 384 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-205ENST00000423941 NUGGCQ68CJ6 796 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 DENND1CQ8IV53 801 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 TMEM105Q8N8V8 129 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 C3orf20Q8ND61 904 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 FLCNQ8NFG4 579 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 IRX2Q9BZI1 471 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-205ENST00000423941 FBRSL1Q9HCM7 1045 aaKnown RBP19.22■□□□□ 0.67
HDAC6-205ENST00000423941 TMEM51Q9NW97 253 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.22■□□□□ 0.67
HDAC6-205ENST00000423941 CALCOCO1Q9P1Z2 691 aa19.22■□□□□ 0.67
HDAC6-205ENST00000423941 ZDBF2Q9HCK1 2354 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 SIGLEC16A6NMB1 481 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 KCNU1A8MYU2 1149 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 ADH1CP00326 375 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 PLEKP08567 350 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-205ENST00000423941 ADH5P11766 374 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 RPS9P46781 194 aaKnown RBP19.21■□□□□ 0.67
HDAC6-205ENST00000423941 GALK1P51570 392 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 VCPP55072 806 aaKnown RBP19.21■□□□□ 0.67
HDAC6-205ENST00000423941 GAD2Q05329 585 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 CCINQ13939 588 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 SLC25A52Q3SY17 297 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 PPP1R15BQ5SWA1 713 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 ADGRF1Q5T601 910 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 RNF43Q68DV7 783 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 ADAM32Q8TC27 787 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.21■□□□□ 0.67
HDAC6-205ENST00000423941 FBXO10Q9UK96 956 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 NENFQ9UMX5 172 aa19.21■□□□□ 0.67
HDAC6-205ENST00000423941 FAM170AA1A519 330 aa19.2■□□□□ 0.66
HDAC6-205ENST00000423941 MFAP3LO75121 409 aa19.2■□□□□ 0.66
HDAC6-205ENST00000423941 RTN2O75298 545 aa19.2■□□□□ 0.66
HDAC6-205ENST00000423941 PENKP01210 267 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-205ENST00000423941 TFE3P19532 575 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-205ENST00000423941 PPP2R5DQ14738 602 aa19.2■□□□□ 0.66
HDAC6-205ENST00000423941 ASTE1Q2TB18 679 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-205ENST00000423941 NAIF1Q69YI7 327 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-205ENST00000423941 MAMSTRQ6ZN01 415 aa19.2■□□□□ 0.66
HDAC6-205ENST00000423941 PHTF2Q8N3S3 785 aa19.2■□□□□ 0.66
HDAC6-205ENST00000423941 SEPT11Q9NVA2 429 aaKnown RBP19.2■□□□□ 0.66
HDAC6-205ENST00000423941 ADAMTS1Q9UHI8 967 aa19.2■□□□□ 0.66
HDAC6-205ENST00000423941 A0A087X0T9 212 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 C2CD4BA6NLJ0 364 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 GOLGA8SH3BPF8 625 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 CACNG3O60359 315 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 ACSL4O60488 711 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 FTLP02792 175 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-205ENST00000423941 FAM228BP0C875 321 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 GBP1P32455 592 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 CXCR3P49682 368 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 NUBP1P53384 320 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 RNASE9P60153 205 aaKnown RBP19.19■□□□□ 0.66
HDAC6-205ENST00000423941 MAPK8IP2Q13387 824 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-205ENST00000423941 UBXN2BQ14CS0 331 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 PON2Q15165 354 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms