RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 PTPRJQ12913 1337 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 A0A087WUV0 522 aaPredicted RBP10.05□□□□□ -0.8
CMSS1-201ENST00000421999 TLR5O60602 858 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 HSPA4LO95757 839 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 HIST1H2AGP0C0S8 130 aaPredicted RBP10.05□□□□□ -0.8
CMSS1-201ENST00000421999 PYGMP11217 842 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 HIST1H2ADP20671 130 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 STIP1P31948 543 aaKnown RBP10.05□□□□□ -0.8
CMSS1-201ENST00000421999 RAD23BP54727 409 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 ATAT1Q5SQI0 421 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 MARC1Q5VT66 337 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 SZRD1Q7Z422 152 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 ZDHHC17Q8IUH5 632 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 CACNA2D3Q8IZS8 1091 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 NUP93Q8N1F7 819 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 TOP6BLQ8N6T0 577 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 ACTL9Q8TC94 416 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 TFAP2BQ92481 460 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 USP13Q92995 863 aaPredicted RBP10.05□□□□□ -0.8
CMSS1-201ENST00000421999 HIST1H2AHQ96KK5 128 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 HIST1H2AJQ99878 128 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 H2AFJQ9BTM1 129 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 B3GNT5Q9BYG0 378 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 SEZ6LQ9BYH1 1024 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 CEP41Q9BYV8 373 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 NEU2Q9Y3R4 380 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 STYXL1Q9Y6J8 313 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 MYH7BA7E2Y1 1941 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 A0A0U1RQF3 1178 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 KCNK1O00180 336 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 ESRRBO95718 433 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 LMO2P25791 158 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 COPS2P61201 443 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 JAMLQ86YT9 394 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 FOPNLQ96NB1 174 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 DCLK3Q9C098 648 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 C20orf96Q9NUD7 363 aaPredicted RBP10.05□□□□□ -0.8
CMSS1-201ENST00000421999 ARHGEF38Q9NXL2 777 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 SLC9A3R1O14745 358 aaPredicted RBP10.05□□□□□ -0.8
CMSS1-201ENST00000421999 IQCF3P0C7M6 154 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 RARGP13631 454 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 GFAPP14136 432 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 PRLRP16471 622 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 MAP4P27816 1152 aaKnown RBP10.05□□□□□ -0.8
CMSS1-201ENST00000421999 MIPP30301 263 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 ARL4DP49703 201 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 ERMARDQ5T6L9 678 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 FAM183BPQ6ZVS7 135 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 FBXO22Q8NEZ5 403 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 ISCUQ9H1K1 167 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 ADAMTS10Q9H324 1103 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 DPEP3Q9H4B8 488 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 GTSE1Q9NYZ3 720 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 TPX2Q9ULW0 747 aaKnown RBP10.05□□□□□ -0.8
CMSS1-201ENST00000421999 PCDHGC5Q9Y5F6 944 aa10.05□□□□□ -0.8
CMSS1-201ENST00000421999 O00370 1275 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 ZNF197O14709 1029 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 CHRM3P20309 590 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 AMPD1P23109 780 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 CYP2F1P24903 491 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 PDAP1Q13442 181 aaKnown RBP10.04□□□□□ -0.8
CMSS1-201ENST00000421999 LPIN1Q14693 890 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 PTPN20Q4JDL3 420 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 ATP13A4Q4VNC1 1196 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 TIGD7Q6NT04 549 aaPredicted RBP10.04□□□□□ -0.8
CMSS1-201ENST00000421999 FAM35AQ86V20 835 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 ARHGAP24Q8N264 748 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 MAB21L3Q8N8X9 362 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 PDZD8Q8NEN9 1154 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 TRPV1Q8NER1 839 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 RMDN2Q96LZ7 410 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 CPXM1Q96SM3 734 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 CYTH2Q99418 400 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 TMEM161AQ9NX61 479 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 ATP5BP06576 529 aaKnown RBP10.04□□□□□ -0.8
CMSS1-201ENST00000421999 PAX3P23760 479 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 NOS2P35228 1153 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 CENPCQ03188 943 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 AADACL2Q6P093 401 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 RAB42Q8N4Z0 105 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 SLC4A11Q8NBS3 891 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 SUSD6Q92537 303 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 WNT8BQ93098 351 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 TCF25Q9BQ70 676 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 DNMT3LQ9UJW3 386 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 FAM50BQ9Y247 325 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 SIGLEC16A6NMB1 481 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 DNM1LO00429 736 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 EOMESO95936 686 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 COILP38432 576 aaPredicted RBP10.04□□□□□ -0.8
CMSS1-201ENST00000421999 CARSP49589 748 aaKnown RBP10.04□□□□□ -0.8
CMSS1-201ENST00000421999 LAMB3Q13751 1172 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 RAP1GAP2Q684P5 730 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 SPOCD1Q6ZMY3 1216 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 PHF13Q86YI8 300 aaPredicted RBP10.04□□□□□ -0.8
CMSS1-201ENST00000421999 EXD1Q8NHP7 514 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 BORCS6Q96GS4 357 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 PPP1R2P1Q96PQ5 205 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 LPIN3Q9BQK8 851 aa10.04□□□□□ -0.8
CMSS1-201ENST00000421999 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms