RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 HCN2Q9UL51 889 aa18.84■□□□□ 0.61
UBXN11-208ENST00000421827 MYO18AQ92614 2054 aaKnown RBP18.84■□□□□ 0.61
UBXN11-208ENST00000421827 FOXN3O00409 490 aaPredicted RBP18.83■□□□□ 0.6
UBXN11-208ENST00000421827 LRP3O75074 770 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 LATS1O95835 1130 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 MBD3O95983 291 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 FYNP06241 537 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 NCAM1P13591 858 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 NTSR1P30989 418 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 PTK2Q05397 1052 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 SPEM2Q0P670 501 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 KCNMA1Q12791 1236 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 USP39Q53GS9 565 aaKnown RBP18.83■□□□□ 0.6
UBXN11-208ENST00000421827 TMEM110Q86TL2 294 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 MDGA1Q8NFP4 955 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 DDI1Q8WTU0 396 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 FAM149B1Q96BN6 582 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 ZC3H10Q96K80 434 aaKnown RBP18.83■□□□□ 0.6
UBXN11-208ENST00000421827 PARD6AQ9NPB6 346 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 STOML2Q9UJZ1 356 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 USP18Q9UMW8 372 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 PCDHGC3Q9UN70 934 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 SLC27A6Q9Y2P4 619 aa18.83■□□□□ 0.6
UBXN11-208ENST00000421827 E5RJQ4 531 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 PAPSS1O43252 624 aaPredicted RBP18.82■□□□□ 0.6
UBXN11-208ENST00000421827 IGLV3-27P01718 113 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 CLCN1P35523 988 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 PDCLQ13371 301 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 MPPE1Q53F39 396 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 ADGRF1Q5T601 910 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 KLHDC7AQ5VTJ3 777 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 CDKAL1Q5VV42 579 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 EGFLAMQ63HQ2 1017 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 NUGGCQ68CJ6 796 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 SASS6Q6UVJ0 657 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 UNC45BQ8IWX7 931 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 DQX1Q8TE96 717 aaKnown RBP18.82■□□□□ 0.6
UBXN11-208ENST00000421827 LOXL4Q96JB6 756 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 TRIM62Q9BVG3 475 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 TAB2Q9NYJ8 693 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 SDK1Q7Z5N4 2213 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 EML5Q05BV3 1969 aa18.82■□□□□ 0.6
UBXN11-208ENST00000421827 SPAG17Q6Q759 2223 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 DCLK1O15075 740 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 TSPAN3O60637 253 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 ID4P47928 161 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 TBX4P57082 545 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 ZNF445P59923 1031 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 RING1Q06587 406 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 PLK5Q496M5 336 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 SDE2Q6IQ49 451 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 BEND5Q7L4P6 421 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 FAM71AQ8IYT1 594 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 CHPFQ8IZ52 775 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 WDTC1Q8N5D0 677 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 HMGB4Q8WW32 186 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 SERPINB11Q96P15 392 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 ACOX2Q99424 681 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 SLC2A11Q9BYW1 496 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 DUSP15Q9H1R2 295 aaPredicted RBP18.81■□□□□ 0.6
UBXN11-208ENST00000421827 LHX5Q9H2C1 402 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 ANO10Q9NW15 660 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 BCCIPQ9P287 314 aaKnown RBP eCLIP18.81■□□□□ 0.6
UBXN11-208ENST00000421827 NAALADL1Q9UQQ1 740 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 INVSQ9Y283 1065 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 FHOD1Q9Y613 1164 aa18.81■□□□□ 0.6
UBXN11-208ENST00000421827 TCRBV21S2A2A0A5A6 115 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 GFRA2O00451 464 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 CAPN9O14815 690 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 EPN2O95208 641 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 PNMA6AP0CW24 399 aaPredicted RBP18.8■□□□□ 0.6
UBXN11-208ENST00000421827 HOXB2P14652 356 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 KRT9P35527 623 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 WASP42768 502 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 SLC11A2P49281 568 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 BPIFB4P59827 614 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 NNTQ13423 1086 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 RAPGEF1Q13905 1077 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 DRAP1Q14919 205 aaPredicted RBP18.8■□□□□ 0.6
UBXN11-208ENST00000421827 ELF2Q15723 593 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 STX1AQ16623 288 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 CCDC183Q5T5S1 534 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 C11orf57Q6ZUT1 292 aaPredicted RBP18.8■□□□□ 0.6
UBXN11-208ENST00000421827 C11orf74Q86VG3 221 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 SLC47A2Q86VL8 602 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 PASD1Q8IV76 773 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 OLIG1Q8TAK6 271 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 TMA16Q96EY4 203 aaKnown RBP18.8■□□□□ 0.6
UBXN11-208ENST00000421827 PIWIL1Q96J94 861 aaKnown RBP18.8■□□□□ 0.6
UBXN11-208ENST00000421827 PPP1R13BQ96KQ4 1090 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 NOX5Q96PH1 765 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 CPXM1Q96SM3 734 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 LSM14BQ9BX40 385 aaKnown RBP18.8■□□□□ 0.6
UBXN11-208ENST00000421827 POPDC2Q9HBU9 364 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 SEMA4GQ9NTN9 838 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 CLEC4EQ9ULY5 219 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 CEP250Q9BV73 2442 aa18.8■□□□□ 0.6
UBXN11-208ENST00000421827 RHOBTB1O94844 696 aa18.79■□□□□ 0.6
UBXN11-208ENST00000421827 UCHL3P15374 230 aa18.79■□□□□ 0.6
UBXN11-208ENST00000421827 HOXD9P28356 352 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms