RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 CD52P31358 61 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 ACADSBP45954 432 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 BRCC3P46736 316 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 ADAM17P78536 824 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 MRPS6P82932 125 aaKnown RBP11.33□□□□□ -0.6
DDX56-203ENST00000421223 LACTB2Q53H82 288 aaPredicted RBP11.33□□□□□ -0.6
DDX56-203ENST00000421223 CGB2Q6NT52 195 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 ZNF449Q6P9G9 518 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 DCAKDQ8WVC6 231 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 SYT15Q9BQS2 421 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 SIK2Q9H0K1 926 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 AGO3Q9H9G7 860 aaKnown RBP11.33□□□□□ -0.6
DDX56-203ENST00000421223 MTMR10Q9NXD2 777 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 SMG5Q9UPR3 1016 aaKnown RBP11.33□□□□□ -0.6
DDX56-203ENST00000421223 CCDC195A0A1B0GUA6 201 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 DPYSL4O14531 572 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 MDM4O15151 490 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 RASSF9O75901 435 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 KCNE1P15382 129 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 CACNA2D1P54289 1103 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 MRPS5P82675 430 aaKnown RBP11.32□□□□□ -0.6
DDX56-203ENST00000421223 SLC45A4Q5BKX6 768 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 SLC9A4Q6AI14 798 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 CLEC20AQ6ZU45 233 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 GPRIN1Q7Z2K8 1008 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 PID1Q7Z2X4 250 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 CAND1Q86VP6 1230 aaKnown RBP11.32□□□□□ -0.6
DDX56-203ENST00000421223 RASAL3Q86YV0 1011 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 ZDHHC17Q8IUH5 632 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 C3orf58Q8NDZ4 430 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 TRPV1Q8NER1 839 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 TFB1MQ8WVM0 346 aaKnown RBP11.32□□□□□ -0.6
DDX56-203ENST00000421223 TEKT4Q8WW24 435 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 KLHL29Q96CT2 875 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 CD248Q9HCU0 757 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 CRTAC1Q9NQ79 661 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 DDIT4Q9NX09 232 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 GDAP2Q9NXN4 497 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.32□□□□□ -0.6
DDX56-203ENST00000421223 NUDT5Q9UKK9 219 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 GABRQQ9UN88 632 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 TEX264Q9Y6I9 313 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 A0A0G2JND7 137 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 IQANK1A0A1B0GTG1 560 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 HAS3O00219 553 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 XPO1O14980 1071 aaKnown RBP11.32□□□□□ -0.6
DDX56-203ENST00000421223 CTGFP29279 349 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 PTPN9P43378 593 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 ADGRD1Q6QNK2 874 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 PAQR9Q6ZVX9 377 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 RSPH3Q86UC2 560 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 LRRC6Q86X45 466 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 ECHDC2Q86YB7 292 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 IFNL1Q8IU54 200 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 COLGALT1Q8NBJ5 622 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 STK32AQ8WU08 396 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 RNF139Q8WU17 664 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 ZNF75CPQ92670 426 aaPredicted RBP11.32□□□□□ -0.6
DDX56-203ENST00000421223 TBC1D31Q96DN5 1066 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 PCED1BQ96HM7 432 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 HSFY1Q96LI6 401 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 APBA2Q99767 749 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 SPC25Q9HBM1 224 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 ZFYVE28Q9HCC9 887 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 PIGVQ9NUD9 493 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 ACTL7BQ9Y614 415 aa11.32□□□□□ -0.6
DDX56-203ENST00000421223 WDR27A2RRH5 827 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 ARL5CA6NH57 179 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 FAM72CH0Y354 149 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 EEF2KO00418 725 aaKnown RBP11.31□□□□□ -0.6
DDX56-203ENST00000421223 CHADO15335 359 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 SRGAP2BP0DMP2 458 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 BDNFP23560 247 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 KCNJ2P63252 427 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 MTFR1Q15390 333 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 DPYSL2Q16555 572 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 SLC25A52Q3SY17 297 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 SWT1Q5T5J6 900 aaKnown RBP11.31□□□□□ -0.6
DDX56-203ENST00000421223 FAM72AQ5TYM5 149 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 NCBP2-AS2Q69YL0 99 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 FAM72DQ6L9T8 149 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 FAM72BQ86X60 149 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 TDRPQ86YL5 185 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 STKLD1Q8NE28 680 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 HTR3CQ8WXA8 447 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 ERP27Q96DN0 273 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 ATXN7L3BQ96GX2 97 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 APOL2Q9BQE5 337 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 PRDM12Q9H4Q4 367 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 ARHGEF4Q9NR80 690 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 SENP1Q9P0U3 644 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 ZMYND8Q9ULU4 1186 aaPredicted RBP11.31□□□□□ -0.6
DDX56-203ENST00000421223 STAP1Q9ULZ2 295 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 MANSC4A6NHS7 340 aaPredicted RBP11.31□□□□□ -0.6
DDX56-203ENST00000421223 E7ESA3 106 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 F8W810 466 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 TOP3BO95985 862 aaKnown RBP11.31□□□□□ -0.6
DDX56-203ENST00000421223 CHRNA1P02708 482 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 VAV1P15498 845 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 FLT3LGP49771 235 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms