RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 EVX2Q03828 476 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 MCL1Q07820 350 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 CLEC4DQ8WXI8 215 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 SMG7Q92540 1137 aaKnown RBP11.05□□□□□ -0.64
PTCH1-206ENST00000421141 BBS2Q9BXC9 721 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 COPS7BQ9H9Q2 264 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-206ENST00000421141 ABCB6Q9NP58 842 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 RAD18Q9NS91 495 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 NDE1Q9NXR1 346 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 ADAM28Q9UKQ2 775 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 CHMP2BQ9UQN3 213 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 APOA4P06727 396 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 MZF1P28698 734 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-206ENST00000421141 MAPK8P45983 427 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 FNTAP49354 379 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 HPCAP84074 193 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 CXorf40AQ8TE69 158 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.05□□□□□ -0.643e-6■■■■■ 50.8
PTCH1-206ENST00000421141 HSD17B14Q9BPX1 270 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 ZDHHC6Q9H6R6 413 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 SYCE1LA8MT33 242 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 C5orf58C9J3I9 102 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 TBL1XO60907 577 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 MAGOHP61326 146 aaKnown RBP11.05□□□□□ -0.64
PTCH1-206ENST00000421141 GABPB1Q06547 395 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-206ENST00000421141 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-206ENST00000421141 NFIL3Q16649 462 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 NLRP9Q7RTR0 991 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 RD3Q7Z3Z2 195 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 MYO1HQ8N1T3 1032 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 MAB21L3Q8N8X9 362 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 COG1Q8WTW3 980 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 HSFY1Q96LI6 401 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 NR2E1Q9Y466 385 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 A0A087X0T9 212 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 E5RJQ4 531 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 JCHAINP01591 159 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 FAM228BP0C875 321 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 ILF2Q12905 390 aaKnown RBP11.05□□□□□ -0.64
PTCH1-206ENST00000421141 CNGA2Q16280 664 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 GLT6D1Q7Z4J2 308 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 C11orf96Q7Z7L8 435 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 MCOLN2Q8IZK6 566 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 SPPL2BQ8TCT7 592 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 STAMBPL1Q96FJ0 436 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 FAM118BQ9BPY3 351 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 ULBP1Q9BZM6 244 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 MAN1C1Q9NR34 630 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 GTF2IRD1Q9UHL9 959 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 XIRP1Q702N8 1843 aaKnown RBP11.05□□□□□ -0.64
PTCH1-206ENST00000421141 LTBP4Q8N2S1 1624 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 MAGEB16A2A368 324 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 APODP05090 189 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 SPATA31D3P0C874 917 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 MAPK9P45984 424 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 SKP1P63208 163 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ARMC12Q5T9G4 340 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 E4F1Q66K89 784 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-206ENST00000421141 FUT10Q6P4F1 479 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 SPATA31D4Q6ZUB0 917 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ANKRD52Q8NB46 1076 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ZNF296Q8WUU4 475 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-206ENST00000421141 KIF17Q9P2E2 1029 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 DNPEPQ9ULA0 475 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ZNF697Q5TEC3 545 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 EFL1Q7Z2Z2 1120 aaKnown RBP11.04□□□□□ -0.64
PTCH1-206ENST00000421141 GBP7Q8N8V2 638 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ZNF214Q9UL59 606 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-206ENST00000421141 PTCH2Q9Y6C5 1203 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ZNF862O60290 1169 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 PLEKP08567 350 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-206ENST00000421141 MMP13P45452 471 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 RRM2BQ7LG56 351 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 TC2NQ8N9U0 490 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 PAWRQ96IZ0 340 aaKnown RBP11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ATP13A3Q9H7F0 1226 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 BLOC1S4Q9NUP1 217 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 TRHDEQ9UKU6 1024 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 SMG5Q9UPR3 1016 aaKnown RBP11.04□□□□□ -0.64
PTCH1-206ENST00000421141 KIAA1217Q5T5P2 1943 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 TBC1D4O60343 1298 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ARIH2O95376 493 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 CYP3A5P20815 502 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 GPR158Q5T848 1215 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 MAGEC3Q8TD91 643 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 DNAJC7Q99615 494 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 VAV3Q9UKW4 847 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ZNF536O15090 1300 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ZNF839A8K0R7 811 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 SEC31AO94979 1220 aaKnown RBP11.04□□□□□ -0.64
PTCH1-206ENST00000421141 PTPN3P26045 913 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 SESN3P58005 492 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 TMCO4Q5TGY1 634 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 CACUL1Q86Y37 369 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 DEFB106AQ8N104 65 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ZYG11BQ9C0D3 744 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ECT2Q9H8V3 914 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 DYRK1BQ9Y463 629 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 ZSCAN5CA6NGD5 496 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms