RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 TULP2O00295 520 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 BIN1O00499 593 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 KRT37O76014 449 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 LMAN2Q12907 356 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 CNGA2Q16280 664 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 MPPE1Q53F39 396 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 FYB2Q5VWT5 728 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 LYSMD4Q5XG99 296 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 ANKS1BQ7Z6G8 1248 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 SYT12Q8IV01 421 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 FMNL3Q8IVF7 1028 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 TMEFF1Q8IYR6 380 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 IRGQQ8WZA9 623 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 CALCOCO1Q9P1Z2 691 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 EVLQ9UI08 416 aaPredicted RBP22.3■■□□□ 1.16
PTPN4-202ENST00000420482 LAMA1P25391 3075 aa22.3■■□□□ 1.16
PTPN4-202ENST00000420482 LNP1A1A4G5 178 aa22.29■■□□□ 1.16
PTPN4-202ENST00000420482 M0QYV0 167 aa22.29■■□□□ 1.16
PTPN4-202ENST00000420482 LATS1O95835 1130 aa22.29■■□□□ 1.16
PTPN4-202ENST00000420482 AFPP02771 609 aaKnown RBP22.29■■□□□ 1.16
PTPN4-202ENST00000420482 LCP1P13796 627 aa22.29■■□□□ 1.16
PTPN4-202ENST00000420482 HOXD12P35452 270 aa22.29■■□□□ 1.16
PTPN4-202ENST00000420482 MARSP56192 900 aaKnown RBP22.29■■□□□ 1.16
PTPN4-202ENST00000420482 RPL6Q02878 288 aaKnown RBP22.29■■□□□ 1.16
PTPN4-202ENST00000420482 ARID5AQ03989 594 aa22.29■■□□□ 1.16
PTPN4-202ENST00000420482 KCNH2Q12809 1159 aa22.29■■□□□ 1.16
PTPN4-202ENST00000420482 EIF4HQ15056 248 aaKnown RBP22.29■■□□□ 1.16
PTPN4-202ENST00000420482 TRIP4Q15650 581 aaPredicted RBP22.29■■□□□ 1.16
PTPN4-202ENST00000420482 RABEPKQ7Z6M1 372 aa22.29■■□□□ 1.16
PTPN4-202ENST00000420482 EHBP1Q8NDI1 1231 aa22.29■■□□□ 1.16
PTPN4-202ENST00000420482 TMEM9BQ9NQ34 198 aa22.29■■□□□ 1.16
PTPN4-202ENST00000420482 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.29■■□□□ 1.16
PTPN4-202ENST00000420482 A0A1W2PQF6 199 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 YJEFN3A6XGL0 299 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 E7ENQ6 273 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 FBXO21O94952 628 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 BMP6P22004 513 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 MFAP3P55082 362 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 DAOAP59103 153 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 PKDCCQ504Y2 493 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 ARMCX6Q7L4S7 300 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 TRIM59Q8IWR1 403 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 RBBP8NLQ8NC74 664 aaPredicted RBP22.28■■□□□ 1.16
PTPN4-202ENST00000420482 CEP76Q8TAP6 659 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 SLC35F5Q8WV83 523 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 EDEM1Q92611 657 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 HSFY1Q96LI6 401 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 FAM81BQ96LP2 452 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 ACOX2Q99424 681 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 LSM14BQ9BX40 385 aaKnown RBP22.28■■□□□ 1.16
PTPN4-202ENST00000420482 SRRTQ9BXP5 876 aaKnown RBP22.28■■□□□ 1.16
PTPN4-202ENST00000420482 CACNA2D2Q9NY47 1150 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 MBD1Q9UIS9 605 aaPredicted RBP22.28■■□□□ 1.16
PTPN4-202ENST00000420482 HCN2Q9UL51 889 aa22.28■■□□□ 1.16
PTPN4-202ENST00000420482 PLXND1Q9Y4D7 1925 aa22.27■■□□□ 1.16
PTPN4-202ENST00000420482 TM4SF5O14894 197 aa22.27■■□□□ 1.16
PTPN4-202ENST00000420482 TIMM44O43615 452 aa22.27■■□□□ 1.16
PTPN4-202ENST00000420482 SYNCRIPO60506 623 aaKnown RBP22.27■■□□□ 1.16
PTPN4-202ENST00000420482 NDUFV2P19404 249 aa22.27■■□□□ 1.16
PTPN4-202ENST00000420482 STX17P56962 302 aa22.27■■□□□ 1.16
PTPN4-202ENST00000420482 TRIM61Q5EBN2 209 aa22.27■■□□□ 1.16
PTPN4-202ENST00000420482 RRAGAQ7L523 313 aa22.27■■□□□ 1.16
PTPN4-202ENST00000420482 BHLHA9Q7RTU4 235 aa22.27■■□□□ 1.16
PTPN4-202ENST00000420482 UNC45BQ8IWX7 931 aa22.27■■□□□ 1.16
PTPN4-202ENST00000420482 FAM217AQ8IXS0 508 aa22.27■■□□□ 1.16
PTPN4-202ENST00000420482 NDRG1Q92597 394 aaKnown RBP22.27■■□□□ 1.16
PTPN4-202ENST00000420482 STON1Q9Y6Q2 735 aa22.27■■□□□ 1.16
PTPN4-202ENST00000420482 ABCA7Q8IZY2 2146 aa22.27■■□□□ 1.15
PTPN4-202ENST00000420482 C4orf47A7E2U8 309 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 SART1O43290 800 aaKnown RBP22.26■■□□□ 1.15
PTPN4-202ENST00000420482 MED7O43513 233 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 GADD45BO75293 160 aaPredicted RBP22.26■■□□□ 1.15
PTPN4-202ENST00000420482 NDUFS2O75306 463 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 PTGER3P43115 390 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 RGS7P49802 495 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 UBE2HP62256 183 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 ST3GAL2Q16842 350 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 ADGRF1Q5T601 910 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 NUGGCQ68CJ6 796 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 ENOSF1Q7L5Y1 443 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 ZNF557Q8N988 423 aaPredicted RBP22.26■■□□□ 1.15
PTPN4-202ENST00000420482 LMO3Q8TAP4 145 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 TFAP2BQ92481 460 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 TRIM62Q9BVG3 475 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 IRX2Q9BZI1 471 aaPredicted RBP22.26■■□□□ 1.15
PTPN4-202ENST00000420482 THAP10Q9P2Z0 257 aaPredicted RBP22.26■■□□□ 1.15
PTPN4-202ENST00000420482 SFMBT1Q9UHJ3 866 aa22.26■■□□□ 1.15
PTPN4-202ENST00000420482 KRT5P13647 590 aa22.25■■□□□ 1.15
PTPN4-202ENST00000420482 BRD2P25440 801 aaKnown RBP22.25■■□□□ 1.15
PTPN4-202ENST00000420482 SLC11A2P49281 568 aa22.25■■□□□ 1.15
PTPN4-202ENST00000420482 GEN1Q17RS7 908 aa22.25■■□□□ 1.15
PTPN4-202ENST00000420482 KIAA1211LQ6NV74 962 aa22.25■■□□□ 1.15
PTPN4-202ENST00000420482 PMF1Q6P1K2 205 aa22.25■■□□□ 1.15
PTPN4-202ENST00000420482 MSANTD2Q6P1R3 559 aa22.25■■□□□ 1.15
PTPN4-202ENST00000420482 KIAA1324Q6UXG2 1013 aaKnown RBP22.25■■□□□ 1.15
PTPN4-202ENST00000420482 FRMD1Q8N878 549 aa22.25■■□□□ 1.15
PTPN4-202ENST00000420482 TMA16Q96EY4 203 aaKnown RBP22.25■■□□□ 1.15
PTPN4-202ENST00000420482 PIWIL1Q96J94 861 aaKnown RBP22.25■■□□□ 1.15
PTPN4-202ENST00000420482 CIPCQ9C0C6 399 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms