RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 APODP05090 189 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 GLI1P08151 1106 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 HMBSP08397 361 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 TGM1P22735 817 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 GRIA2P42262 883 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 FNTBP49356 437 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 HARS2P49590 506 aaKnown RBP22.3■■□□□ 1.16
CPNE1-211ENST00000420363 ZNF445P59923 1031 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 POLR2FP61218 127 aaKnown RBP22.3■■□□□ 1.16
CPNE1-211ENST00000420363 RING1Q06587 406 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 SPEM2Q0P670 501 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 IQCB1Q15051 598 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 ANO4Q32M45 955 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 PHTF2Q8N3S3 785 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 EPS8L1Q8TE68 723 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 IPO4Q8TEX9 1081 aaKnown RBP22.3■■□□□ 1.16
CPNE1-211ENST00000420363 ACDQ96AP0 544 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 FAM149B1Q96BN6 582 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 SERPINB11Q96P15 392 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 STOML2Q9UJZ1 356 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 AGO1Q9UL18 857 aaKnown RBP22.3■■□□□ 1.16
CPNE1-211ENST00000420363 EPHB6O15197 1021 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 KAT7O95251 611 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 FYNP06241 537 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 RETP07949 1114 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 HOXA6P31267 233 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 NUGGCQ68CJ6 796 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 TMEM35BQ8NCS4 154 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 NEK11Q8NG66 645 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 DQX1Q8TE96 717 aaKnown RBP22.29■■□□□ 1.16
CPNE1-211ENST00000420363 DDX1Q92499 740 aaKnown RBP22.29■■□□□ 1.16
CPNE1-211ENST00000420363 XPO6Q96QU8 1125 aaKnown RBP22.29■■□□□ 1.16
CPNE1-211ENST00000420363 SPAG5Q96R06 1193 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 BBS2Q9BXC9 721 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 POPDC2Q9HBU9 364 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 PARD6AQ9NPB6 346 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 ARHGEF4Q9NR80 690 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 DEC1Q9P2X7 70 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 SFMBT1Q9UHJ3 866 aa22.29■■□□□ 1.16
CPNE1-211ENST00000420363 NEDD8-MDP1E9PL57 170 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 K7EQS6 105 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 K7ESF4 209 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 MSI1O43347 362 aaKnown RBP22.28■■□□□ 1.16
CPNE1-211ENST00000420363 HRO43593 1189 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 TULP3O75386 442 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 PENKP01210 267 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-211ENST00000420363 NCAM1P13591 858 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 TYRP14679 529 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 SOX5P35711 763 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 DMWDQ09019 674 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 HSF5Q4G112 596 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-211ENST00000420363 HEATR6Q6AI08 1181 aaKnown RBP22.28■■□□□ 1.16
CPNE1-211ENST00000420363 TPGS1Q6ZTW0 290 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 LONP2Q86WA8 852 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 ZDHHC17Q8IUH5 632 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 DENND1CQ8IV53 801 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 TERB1Q8NA31 727 aa22.28■■□□□ 1.16
CPNE1-211ENST00000420363 IRX2Q9BZI1 471 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-211ENST00000420363 STAT1P42224 750 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 TNFRSF4P43489 277 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 SLC6A11P48066 632 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 YWHAZP63104 245 aaKnown RBP22.27■■□□□ 1.16
CPNE1-211ENST00000420363 PTPN20Q4JDL3 420 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 FYB2Q5VWT5 728 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 PKN3Q6P5Z2 889 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 TOGARAM2Q6ZUX3 1019 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 NUDT18Q6ZVK8 323 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 SYT13Q7L8C5 426 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 NOP9Q86U38 636 aaKnown RBP22.27■■□□□ 1.16
CPNE1-211ENST00000420363 UNC45BQ8IWX7 931 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 RPLP0P6Q8NHW5 317 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 USP33Q8TEY7 942 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 PCMTD1Q96MG8 357 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-211ENST00000420363 RTKNQ9BST9 563 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 PDCL3Q9H2J4 239 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 NLRC4Q9NPP4 1024 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 RTN4Q9NQC3 1192 aaKnown RBP22.27■■□□□ 1.16
CPNE1-211ENST00000420363 TJP2Q9UDY2 1190 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 NOCTQ9UK39 431 aaKnown RBP22.27■■□□□ 1.16
CPNE1-211ENST00000420363 TLR6Q9Y2C9 796 aa22.27■■□□□ 1.16
CPNE1-211ENST00000420363 CAPN9O14815 690 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 HSF2BPO75031 334 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 LRP3O75074 770 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 IGLV3-25P01717 112 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 CHRM1P11229 460 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-211ENST00000420363 SCNN1AP37088 669 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 MRPS21P82921 87 aaKnown RBP22.26■■□□□ 1.15
CPNE1-211ENST00000420363 KDSRQ06136 332 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 MESP2Q0VG99 397 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 ZSCAN23Q3MJ62 389 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 FILIP1LQ4L180 1135 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 EFHC1Q5JVL4 640 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 GRAMD4Q6IC98 578 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 OLFML1Q6UWY5 402 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 SLC26A9Q7LBE3 791 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-211ENST00000420363 MSANTD4Q8NCY6 345 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 ZNF397Q8NF99 534 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-211ENST00000420363 KCNV2Q8TDN2 545 aa22.26■■□□□ 1.15
CPNE1-211ENST00000420363 AZIN2Q96A70 460 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms