RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 SPRED2Q7Z698 418 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 C12orf50Q8NA57 414 aaPredicted RBP14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 GIPC2Q8TF65 315 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 RAPGEF5Q92565 580 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 EDEM1Q92611 657 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 AZIN2Q96A70 460 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 MS4A14Q96JA4 679 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 C1orf74Q96LT6 269 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 RUNDC3BQ96NL0 473 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 ASB2Q96Q27 587 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 SNRNP25Q9BV90 132 aaKnown RBP14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 CARD6Q9BX69 1037 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 WDCPQ9H6R7 721 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 IL21Q9HBE4 155 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 TRPM5Q9NZQ8 1165 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 PCSK1NQ9UHG2 260 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 ZMYM5Q9UJ78 669 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 MTUS1Q9ULD2 1270 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 HBS1LQ9Y450 684 aaKnown RBP14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 GREB1Q4ZG55 1949 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 CLUHO75153 1309 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 MUC3AQ02505 3323 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 REV3LO60673 3130 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 hCG_1818297A0A087WSY0 165 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 TLR5O60602 858 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 TADA3O75528 432 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 OAS1P00973 400 aaKnown RBP14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 LRG1P02750 347 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 IL4RP24394 825 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 L1CAMP32004 1257 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 SSR1P43307 286 aaKnown RBP14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 CDR1P51861 262 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 SIX1Q15475 284 aaPredicted RBP14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 PTPROQ16827 1216 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 DUSP6Q16828 381 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 LONRF2Q1L5Z9 754 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 HECTD3Q5T447 861 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 MFSD7Q6UXD7 560 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 TMEM184AQ6ZMB5 413 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 TMEM150AQ86TG1 271 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 TMC8Q8IU68 726 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 ELMOD1Q8N336 334 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 KCTD6Q8NC69 237 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 GPR152Q8TDT2 470 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 MICAL1Q8TDZ2 1067 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 CASP10Q92851 521 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 MRPL38Q96DV4 380 aaKnown RBP14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 ZNF512Q96ME7 567 aaPredicted RBP14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 RETREG1Q9H6L5 497 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 LRRC19Q9H756 370 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 ZWILCHQ9H900 591 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 PRDM6Q9NQX0 595 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 TTC28Q96AY4 2481 aa14.81□□□□□ -0.04
SHMT1P1-201ENST00000419974 GOLGA6L10A0A0M3HER8 536 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 LRRD1A4D1F6 860 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 KRT1P04264 644 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 ATP5C1P36542 298 aaKnown RBP14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 ZNF211Q13398 564 aaPredicted RBP14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 TFDP2Q14188 446 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 DPYSL3Q14195 570 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 TRIP4Q15650 581 aaPredicted RBP14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 AAK1Q2M2I8 961 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 RAB6CQ53S08 254 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 ODF2Q5BJF6 829 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 EFHC2Q5JST6 749 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 KCNT1Q5JUK3 1230 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 SCYL2Q6P3W7 929 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 BBS12Q6ZW61 710 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 FAM131BQ86XD5 332 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 TTC13Q8NBP0 860 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 SLCO2A1Q92959 643 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 CAPZA3Q96KX2 299 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 RAB6CQ9H0N0 254 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 FAM204AQ9H8W3 233 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 PCDH18Q9HCL0 1135 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 DNMT3LQ9UJW3 386 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 AP4E1Q9UPM8 1137 aa14.8□□□□□ -0.04
SHMT1P1-201ENST00000419974 KRIT1O00522 736 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 TUBBP07437 444 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 ZFXP17010 805 aaPredicted RBP14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 DDX6P26196 483 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 CDC25CP30307 473 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 HOXC13P31276 330 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 FNTAP49354 379 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 DNA2P51530 1060 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 ATXN1P54253 815 aaKnown RBP14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 COG7P83436 770 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 NME3Q13232 169 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 TAF12Q16514 161 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 CCNG2Q16589 344 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 SMTNL2Q2TAL5 461 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 PPM1LQ5SGD2 360 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 NUGGCQ68CJ6 796 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 SLC9A4Q6AI14 798 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 UNC45BQ8IWX7 931 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 ZDHHC14Q8IZN3 488 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 CCDC185Q8N715 623 aa14.79□□□□□ -0.04
SHMT1P1-201ENST00000419974 RUBCNQ92622 972 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms