RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 LRRC57Q8N9N7 239 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 ZSCAN18Q8TBC5 510 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-208ENST00000419606 RSPRY1Q96DX4 576 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 PGAP3Q96FM1 320 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-208ENST00000419606 SLC39A13Q96H72 371 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 FCRL2Q96LA5 508 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-208ENST00000419606 LRRC3BQ96PB8 259 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 CDK5RAP1Q96SZ6 601 aaKnown RBP13.35□□□□□ -0.27
ATG4B-208ENST00000419606 KCND1Q9NSA2 647 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.35□□□□□ -0.278e-14■□□□□ 9.8
ATG4B-208ENST00000419606 PCSK1NQ9UHG2 260 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 ALG6Q9Y672 507 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 GREM1O60565 184 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 STC2O76061 302 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 FTCDO95954 541 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 IGLV3-27P01718 113 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 TNNT1P13805 278 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 COMTP21964 271 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 MIPP30301 263 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 GBP2P32456 591 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-208ENST00000419606 RDXP35241 583 aaKnown RBP13.34□□□□□ -0.27
ATG4B-208ENST00000419606 VIPR2P41587 438 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 SSR1P43307 286 aaKnown RBP13.34□□□□□ -0.27
ATG4B-208ENST00000419606 CXCR3P49682 368 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 SLC7A9P82251 487 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 ATP13A4Q4VNC1 1196 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 C11orf63Q6NUN7 778 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 STRADAQ7RTN6 431 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 SLFN11Q7Z7L1 901 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 DAAM2Q86T65 1068 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 ARID3BQ8IVW6 561 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-208ENST00000419606 RNF10Q8N5U6 811 aaKnown RBP13.34□□□□□ -0.27
ATG4B-208ENST00000419606 ACSF2Q96CM8 615 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-208ENST00000419606 SERPINB11Q96P15 392 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 GPATCH2LQ9NWQ4 482 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 RRN3Q9NYV6 651 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 XPO7Q9UIA9 1087 aaKnown RBP13.34□□□□□ -0.27
ATG4B-208ENST00000419606 CDH7Q9ULB5 785 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 PACSIN2Q9UNF0 486 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-208ENST00000419606 TLR6Q9Y2C9 796 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 SNX10Q9Y5X0 201 aa13.34□□□□□ -0.27
ATG4B-208ENST00000419606 LEFTY2O00292 366 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 RNF8O76064 485 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 MOCS2O96007 188 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-208ENST00000419606 KLKB1P03952 638 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 FCARP24071 287 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 GBP1P32455 592 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 MAN1A1P33908 653 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 GJC1P36383 396 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 AVPR1AP37288 418 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 GGCXP38435 758 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 MARCKSL1P49006 195 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 SLC25A11Q02978 314 aaKnown RBP13.33□□□□□ -0.28
ATG4B-208ENST00000419606 CA9Q16790 459 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 LEXMQ3ZCV2 418 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 TANGO2Q6ICL3 276 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 TADA2BQ86TJ2 420 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 SLC35F6Q8N357 371 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 SH3RF2Q8TEC5 729 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 RNF34Q969K3 372 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 ASB16Q96NS5 453 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 ZWILCHQ9H900 591 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 TDP1Q9NUW8 608 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 CFAP97Q9P2B7 532 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 USP18Q9UMW8 372 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 ARHGAP26Q9UNA1 814 aa13.33□□□□□ -0.28
ATG4B-208ENST00000419606 HBS1LQ9Y450 684 aaKnown RBP13.33□□□□□ -0.28
ATG4B-208ENST00000419606 GOLGA6L7A0A1B0GV03 622 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 LAMP2P13473 410 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 IL9P15248 144 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 PFKLP17858 780 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 COG7P83436 770 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 SMTNL2Q2TAL5 461 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 KCNT1Q5JUK3 1230 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 ZNF569Q5MCW4 686 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 PTCRAQ6ISU1 281 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-208ENST00000419606 PARM1Q6UWI2 310 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 NT5DC3Q86UY8 548 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 PYROXD2Q8N2H3 581 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 KRT35Q92764 455 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 NECTIN4Q96NY8 510 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 RPP25Q9BUL9 199 aaKnown RBP13.32□□□□□ -0.28
ATG4B-208ENST00000419606 SNRNP25Q9BV90 132 aaKnown RBP13.32□□□□□ -0.28
ATG4B-208ENST00000419606 PLA2G2FQ9BZM2 168 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 TKTL2Q9H0I9 626 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 WDCPQ9H6R7 721 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 KLHL11Q9NVR0 708 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 ARHGEF38Q9NXL2 777 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 GDE1Q9NZC3 331 aa13.32□□□□□ -0.28
ATG4B-208ENST00000419606 PRUNE2Q8WUY3 3088 aa13.31□□□□□ -0.28
ATG4B-208ENST00000419606 SOBPA7XYQ1 873 aa13.31□□□□□ -0.28
ATG4B-208ENST00000419606 KCNU1A8MYU2 1149 aa13.31□□□□□ -0.28
ATG4B-208ENST00000419606 C2CD4DB7Z1M9 353 aa13.31□□□□□ -0.28
ATG4B-208ENST00000419606 FANCGO15287 622 aa13.31□□□□□ -0.28
ATG4B-208ENST00000419606 SPOPO43791 374 aa13.31□□□□□ -0.28
ATG4B-208ENST00000419606 PAGE1O75459 146 aa13.31□□□□□ -0.28
ATG4B-208ENST00000419606 F9P00740 461 aa13.31□□□□□ -0.28
ATG4B-208ENST00000419606 RARAP10276 462 aa13.31□□□□□ -0.28
ATG4B-208ENST00000419606 CORO1AP31146 461 aaKnown RBP13.31□□□□□ -0.28
ATG4B-208ENST00000419606 CCR1P32246 355 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms