RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 MSI1O43347 362 aaKnown RBP17.18■□□□□ 0.34
LINC00404-201ENST00000418660 EEF1GP26641 437 aaKnown RBP17.18■□□□□ 0.34
LINC00404-201ENST00000418660 LMNB2Q03252 620 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 KCNJ12Q14500 433 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 CSRP2Q16527 193 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 PLK5Q496M5 336 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 MPPE1Q53F39 396 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 EGFLAMQ63HQ2 1017 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 SDE2Q6IQ49 451 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 TMEM110Q86TL2 294 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 C11orf74Q86VG3 221 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 ENOX1Q8TC92 643 aaKnown RBP17.18■□□□□ 0.34
LINC00404-201ENST00000418660 DDI1Q8WTU0 396 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 RMDN1Q96DB5 314 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 SLC2A11Q9BYW1 496 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 SEMA4GQ9NTN9 838 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 CYTH4Q9UIA0 394 aa17.18■□□□□ 0.34
LINC00404-201ENST00000418660 PRR5-ARHGAP8B1AHC4 643 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 RHOBTB1O94844 696 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 EPN2O95208 641 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 IGLV3-27P01718 113 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 FYNP06241 537 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 NCAM1P13591 858 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 ZNF445P59923 1031 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 ARHGAP8P85298 464 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 PTK2Q05397 1052 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 RING1Q06587 406 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 ELF2Q15723 593 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 TCP11X2Q5H9J9 407 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 ADGRF1Q5T601 910 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 DPY19L2P1Q6NXN4 242 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 BEND5Q7L4P6 421 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 UNC45BQ8IWX7 931 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 CHPFQ8IZ52 775 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 OLIG1Q8TAK6 271 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 TRIM62Q9BVG3 475 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 DUSP15Q9H1R2 295 aaPredicted RBP17.17■□□□□ 0.34
LINC00404-201ENST00000418660 ARRDC1-AS1Q9H2J1 176 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 AJAP1Q9UKB5 411 aaPredicted RBP17.17■□□□□ 0.34
LINC00404-201ENST00000418660 PCDHGC3Q9UN70 934 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 INVSQ9Y283 1065 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 NFE2L3Q9Y4A8 694 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 CFAP54Q96N23 3096 aa17.17■□□□□ 0.34
LINC00404-201ENST00000418660 TCRBV21S2A2A0A5A6 115 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 E5RJQ4 531 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 FOXN3O00409 490 aaPredicted RBP17.16■□□□□ 0.34
LINC00404-201ENST00000418660 GFRA2O00451 464 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 PAPSS1O43252 624 aaPredicted RBP17.16■□□□□ 0.34
LINC00404-201ENST00000418660 FOXD2O60548 495 aaPredicted RBP17.16■□□□□ 0.34
LINC00404-201ENST00000418660 HOXB2P14652 356 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 SDHBP21912 280 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 WASP42768 502 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 TBX4P57082 545 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 KCNMA1Q12791 1236 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 NUGGCQ68CJ6 796 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 HMGB4Q8WW32 186 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 AZIN2Q96A70 460 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 FAM149B1Q96BN6 582 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 TMA16Q96EY4 203 aaKnown RBP17.16■□□□□ 0.34
LINC00404-201ENST00000418660 PIWIL1Q96J94 861 aaKnown RBP17.16■□□□□ 0.34
LINC00404-201ENST00000418660 ACOX2Q99424 681 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 IRX2Q9BZI1 471 aaPredicted RBP17.16■□□□□ 0.34
LINC00404-201ENST00000418660 LHX5Q9H2C1 402 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 DLL3Q9NYJ7 618 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 BCCIPQ9P287 314 aaKnown RBP eCLIP17.16■□□□□ 0.34
LINC00404-201ENST00000418660 NAALADL1Q9UQQ1 740 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 PCDHGA5Q9Y5G8 931 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 EML5Q05BV3 1969 aa17.16■□□□□ 0.34
LINC00404-201ENST00000418660 A0A1W2PQF6 199 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 PES1O00541 588 aaKnown RBP17.15■□□□□ 0.34
LINC00404-201ENST00000418660 TSPAN3O60637 253 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 GBP1P32455 592 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 CLCN1P35523 988 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 SLC11A2P49281 568 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 PDCLQ13371 301 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 NNTQ13423 1086 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 BYSLQ13895 437 aaKnown RBP17.15■□□□□ 0.34
LINC00404-201ENST00000418660 PUM1Q14671 1186 aaKnown RBP eCLIP17.15■□□□□ 0.34
LINC00404-201ENST00000418660 GEN1Q17RS7 908 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 RSPO4Q2I0M5 234 aaPredicted RBP17.15■□□□□ 0.34
LINC00404-201ENST00000418660 PRR23CQ6ZRP0 262 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 ANKS1BQ7Z6G8 1248 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 FAM71AQ8IYT1 594 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 PGBD3Q8N328 593 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 WDTC1Q8N5D0 677 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 DQX1Q8TE96 717 aaKnown RBP17.15■□□□□ 0.34
LINC00404-201ENST00000418660 SERPINB11Q96P15 392 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 GABRG3Q99928 467 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 CLEC4EQ9ULY5 219 aa17.15■□□□□ 0.34
LINC00404-201ENST00000418660 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.15■□□□□ 0.34
LINC00404-201ENST00000418660 CAPN9O14815 690 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 NPC1O15118 1278 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 ZBTB24O43167 697 aaPredicted RBP17.14■□□□□ 0.33
LINC00404-201ENST00000418660 ACSL4O60488 711 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 GABRG2P18507 467 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 HOXD9P28356 352 aaPredicted RBP17.14■□□□□ 0.33
LINC00404-201ENST00000418660 KRT9P35527 623 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 P2RY2P41231 377 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 BPIFB4P59827 614 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 YWHAZP63104 245 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms