RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 NELL2Q99435 816 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 DNAJC7Q99615 494 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 C11orf70Q9BRQ4 267 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 SPHK2Q9NRA0 654 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 AGO1Q9UL18 857 aaKnown RBP19.44■□□□□ 0.7
PTCD3-204ENST00000418628 TLR6Q9Y2C9 796 aa19.44■□□□□ 0.7
PTCD3-204ENST00000418628 LUC7L2Q9Y383 392 aaKnown RBP19.44■□□□□ 0.7
PTCD3-204ENST00000418628 PLXND1Q9Y4D7 1925 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 GRAP2O75791 330 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 TRUB2O95900 331 aaKnown RBP19.43■□□□□ 0.7
PTCD3-204ENST00000418628 ADH1CP00326 375 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 AVPR2P30518 371 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 EIF2DP41214 584 aaKnown RBP19.43■□□□□ 0.7
PTCD3-204ENST00000418628 MATKP42679 507 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 NSFP46459 744 aaKnown RBP19.43■□□□□ 0.7
PTCD3-204ENST00000418628 RPS9P46781 194 aaKnown RBP19.43■□□□□ 0.7
PTCD3-204ENST00000418628 C1QBPQ07021 282 aaKnown RBP19.43■□□□□ 0.7
PTCD3-204ENST00000418628 KLHL30Q0D2K2 578 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 TBX2Q13207 712 aaPredicted RBP19.43■□□□□ 0.7
PTCD3-204ENST00000418628 NUGGCQ68CJ6 796 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 RNF43Q68DV7 783 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 SUGP1Q8IWZ8 645 aaKnown RBP19.43■□□□□ 0.7
PTCD3-204ENST00000418628 PHTF2Q8N3S3 785 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 AZIN2Q96A70 460 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 NPY6RQ99463 290 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 TAS2R14Q9NYV8 317 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 CALCOCO1Q9P1Z2 691 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 MRPS17Q9Y2R5 130 aaKnown RBP19.43■□□□□ 0.7
PTCD3-204ENST00000418628 SPAG17Q6Q759 2223 aa19.43■□□□□ 0.7
PTCD3-204ENST00000418628 DDX3XO00571 662 aaKnown RBP eCLIP19.42■□□□□ 0.76e-15■■■■□ 25.2
PTCD3-204ENST00000418628 HMBSP08397 361 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 CHRM1P11229 460 aaPredicted RBP19.42■□□□□ 0.7
PTCD3-204ENST00000418628 CHRNB1P11230 501 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 ADH5P11766 374 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 GZMAP12544 262 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 NOS2P35228 1153 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 FLT3P36888 993 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 TBX4P57082 545 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 NR1H3Q13133 447 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 DCAF6Q58WW2 860 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 FAM102AQ5T9C2 384 aaPredicted RBP19.42■□□□□ 0.7
PTCD3-204ENST00000418628 FSTL4Q6MZW2 842 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 C12orf40Q86WS4 652 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 DENND1CQ8IV53 801 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 ADAM32Q8TC27 787 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 EZH1Q92800 747 aaPredicted RBP19.42■□□□□ 0.7
PTCD3-204ENST00000418628 PGAP3Q96FM1 320 aaPredicted RBP19.42■□□□□ 0.7
PTCD3-204ENST00000418628 RRN3Q9NYV6 651 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 WDR35Q9P2L0 1181 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 NENFQ9UMX5 172 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 SIT1Q9Y3P8 196 aa19.42■□□□□ 0.7
PTCD3-204ENST00000418628 BZW2Q9Y6E2 419 aaKnown RBP19.42■□□□□ 0.7
PTCD3-204ENST00000418628 FAM170AA1A519 330 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 CAPN9O14815 690 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 CACNG3O60359 315 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 PENKP01210 267 aaPredicted RBP19.41■□□□□ 0.7
PTCD3-204ENST00000418628 CALB1P05937 261 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 SKILP12757 684 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 MAGEA9P43362 315 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 AMPD2Q01433 879 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 UBXN2BQ14CS0 331 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 PON2Q15165 354 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 FAM133BQ5BKY9 247 aaKnown RBP19.41■□□□□ 0.7
PTCD3-204ENST00000418628 ACAD10Q6JQN1 1059 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 PPP1R2P3Q6NXS1 205 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 WDR59Q6PJI9 974 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 TMEM25Q86YD3 366 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 DRC7Q8IY82 874 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 C3orf20Q8ND61 904 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 VCPIP1Q96JH7 1222 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 FBRSL1Q9HCM7 1045 aaKnown RBP19.41■□□□□ 0.7
PTCD3-204ENST00000418628 ADAM22Q9P0K1 906 aa19.41■□□□□ 0.7
PTCD3-204ENST00000418628 FAM170BA6NMN3 283 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 MFAP3LO75121 409 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 SERPING1P05155 500 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 PLEKP08567 350 aaPredicted RBP19.4■□□□□ 0.7
PTCD3-204ENST00000418628 TFE3P19532 575 aaPredicted RBP19.4■□□□□ 0.7
PTCD3-204ENST00000418628 TNFAIP3P21580 790 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 CHKAP35790 457 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 HARS2P49590 506 aaKnown RBP19.4■□□□□ 0.7
PTCD3-204ENST00000418628 NUBP1P53384 320 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 CDK17Q00537 523 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 GAD2Q05329 585 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 MESP2Q0VG99 397 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 PPP1R15BQ5SWA1 713 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 FYB2Q5VWT5 728 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 NADSYN1Q6IA69 706 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 UNC45BQ8IWX7 931 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 MCOLN2Q8IZK6 566 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 CPLX3Q8WVH0 158 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 CD101Q93033 1021 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 MRFAP1L1Q96HT8 127 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 P2RY13Q9BPV8 354 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 IRX2Q9BZI1 471 aaPredicted RBP19.4■□□□□ 0.7
PTCD3-204ENST00000418628 TRIM5Q9C035 493 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 CHRDQ9H2X0 955 aa19.4■□□□□ 0.7
PTCD3-204ENST00000418628 METTL5Q9NRN9 209 aaKnown RBP19.4■□□□□ 0.7
PTCD3-204ENST00000418628 SEPT11Q9NVA2 429 aaKnown RBP19.4■□□□□ 0.7
PTCD3-204ENST00000418628 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.4■□□□□ 0.7
PTCD3-204ENST00000418628 ARHGAP20Q9P2F6 1191 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms