RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 WNT6Q9Y6F9 365 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 MAPK8IP3Q9UPT6 1336 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 C9orf84Q5VXU9 1444 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 PRAG1Q86YV5 1406 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 SYNJ2O15056 1496 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 ABCC10Q5T3U5 1492 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 CCDC141Q6ZP82 1450 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 MAGI1Q96QZ7 1491 aaPredicted RBP3.07□□□□□ -1.92
VPS41-206ENST00000418457 IQGAP3Q86VI3 1631 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 AQP12BA6NM10 295 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 ZNF213O14771 459 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 ATP10AO60312 1499 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 EXOC3O60645 756 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 NUP155O75694 1391 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 PIK3C2GO75747 1445 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 JTBO76095 146 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 FGAP02671 866 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 DRD1P21728 446 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 FPR3P25089 353 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 ADRA1DP25100 572 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 MCM5P33992 734 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 PBX1P40424 430 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 IQGAP1P46940 1657 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 DGKQP52824 942 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 ELLP55199 621 aaPredicted RBP3.06□□□□□ -1.92
VPS41-206ENST00000418457 CYP4F2P78329 520 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 TXNL4AP83876 142 aaKnown RBP3.06□□□□□ -1.92
VPS41-206ENST00000418457 PSG6Q00889 435 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 CGNL1Q0VF96 1302 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 LMAN2Q12907 356 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 MTAPQ13126 283 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 FHL3Q13643 280 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 SHROOM2Q13796 1616 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 TRIM14Q14142 442 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 KRT72Q14CN4 511 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 ELF2Q15723 593 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 ZACNQ401N2 412 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 RNASE12Q5GAN4 147 aaKnown RBP3.06□□□□□ -1.92
VPS41-206ENST00000418457 TLDC1Q6P9B6 456 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 KIRREL2Q6UWL6 708 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 TRIM72Q6ZMU5 477 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 PREX2Q70Z35 1606 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 GATAD2AQ86YP4 633 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 BOLLQ8N9W6 283 aaKnown RBP3.06□□□□□ -1.92
VPS41-206ENST00000418457 TERB1Q8NA31 727 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 FRAT1Q92837 279 aaPredicted RBP3.06□□□□□ -1.92
VPS41-206ENST00000418457 DAZAP1Q96EP5 407 aaKnown RBP3.06□□□□□ -1.92
VPS41-206ENST00000418457 NEURL4Q96JN8 1562 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 ARPC5LQ9BPX5 153 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 NUDT22Q9BRQ3 303 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 SCAPERQ9BY12 1400 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 CIPCQ9C0C6 399 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 TMEM8AQ9HCN3 771 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 OBP2BQ9NPH6 170 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 HELLSQ9NRZ9 838 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 TFCP2L1Q9NZI6 479 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 SH3BP4Q9P0V3 963 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 FAM135AQ9P2D6 1515 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 IGSF9Q9P2J2 1179 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 ARPP21Q9UBL0 812 aaPredicted RBP3.06□□□□□ -1.92
VPS41-206ENST00000418457 LPAR3Q9UBY5 353 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 NPC1L1Q9UHC9 1359 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 ADAM21Q9UKJ8 722 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 ASAP1Q9ULH1 1129 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 KIAA1210Q9ULL0 1709 aa3.06□□□□□ -1.92
VPS41-206ENST00000418457 KIF13AQ9H1H9 1805 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 COL11A2P13942 1736 aaPredicted RBP3.05□□□□□ -1.92
VPS41-206ENST00000418457 NKTRP30414 1462 aaKnown RBP3.05□□□□□ -1.92
VPS41-206ENST00000418457 GRIN2AQ12879 1464 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 ERBINQ96RT1 1412 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 SPATA31A6Q5VVP1 1343 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 PNMA6EA0A0J9YXQ4 647 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 LGALS16A8MUM7 142 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 TARM1B6A8C7 271 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 J3KTA2 159 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 NPC1O15118 1278 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 SUV39H1O43463 412 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 ASNA1O43681 348 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 CBFA2T3O75081 653 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 PROP1O75360 226 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 USP1O94782 785 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 NTSR2O95665 410 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 IGLV2-14P01704 120 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 TSPY4P0CV99 314 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 TSPY10P0CW01 314 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 NPPBP16860 134 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 PTMSP20962 102 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 PDIA3P30101 505 aaKnown RBP3.05□□□□□ -1.92
VPS41-206ENST00000418457 GSTM5P46439 218 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 TRAPPC10P48553 1259 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 DIO1P49895 249 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 ALDH18A1P54886 795 aaKnown RBP3.05□□□□□ -1.92
VPS41-206ENST00000418457 INHBEP58166 350 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 TMF1P82094 1093 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 HOXA4Q00056 320 aaPredicted RBP3.05□□□□□ -1.92
VPS41-206ENST00000418457 DEUP1Q05D60 604 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 BFSP2Q13515 415 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 BLMHQ13867 455 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 PTK2BQ14289 1009 aa3.05□□□□□ -1.92
VPS41-206ENST00000418457 CSHL1Q14406 222 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms