RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 SEMA6AQ9H2E6 1030 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 MTO1Q9Y2Z2 717 aaKnown RBP13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 NHSL1Q5SYE7 1610 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 COL16A1Q07092 1604 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 SPATA31C2B4DYI2 1134 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 TSPAN3O60637 253 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 ZC3H11AO75152 810 aaKnown RBP eCLIP13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 LYPLA2O95372 231 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 BLMHQ13867 455 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 MPZL3Q6UWV2 235 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 WDR49Q8IV35 697 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 OR52K1Q8NGK4 314 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 ABTB1Q969K4 478 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 CNBD2Q96M20 576 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 DHX33Q9H6R0 707 aaKnown RBP13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 DPP3Q9NY33 737 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 MSCO60682 206 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 FARP2O94887 1054 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 EPHA3P29320 983 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 ARL4AP40617 200 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 NDUFV1P49821 464 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 NUDT2P50583 147 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 TMEM198Q66K66 360 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 ADGRD1Q6QNK2 874 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 AFG1LQ8WV93 481 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 ATP2A3Q93084 1043 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 OSMRQ99650 979 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 SETD4Q9NVD3 440 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 CLEC11AQ9Y240 323 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 SCN9AQ15858 1988 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 STX16-NPEPL1H3BU86 382 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 PLSCR1O15162 318 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 CSPG5O95196 566 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 HOXC6P09630 235 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 CCNB1P14635 433 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 SP100P23497 879 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 LMO2P25791 158 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 PSMB4P28070 264 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 CASP2P42575 452 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 PLIN5Q00G26 463 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 SLC25A11Q02978 314 aaKnown RBP13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 PCSK7Q16549 785 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 TNFAIP8L3Q5GJ75 292 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 PPP1R15BQ5SWA1 713 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 TRNP1Q6NT89 227 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 PAOXQ6QHF9 649 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 SPATA24Q86W54 205 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 ULK2Q8IYT8 1036 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 RIBC1Q8N443 379 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 CCDC185Q8N715 623 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 COLGALT1Q8NBJ5 622 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 AGAP2Q99490 1192 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 NT5C1AQ9BXI3 368 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 NUF2Q9BZD4 464 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 ADA2Q9NZK5 511 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 SIX4Q9UIU6 781 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 CORO1CQ9ULV4 474 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 ARFGEF1Q9Y6D6 1849 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 STBD1O95210 358 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 ATP6V1C1P21283 382 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 MCL1Q07820 350 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 MMEL1Q495T6 779 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 PRAMEF19Q5SWL8 479 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 B4GALNT2Q8NHY0 566 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 RAB3IL1Q8TBN0 382 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 KHSRPQ92945 711 aaKnown RBP eCLIP13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 RNF157Q96PX1 679 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 WWP1Q9H0M0 922 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 SLC7A8Q9UHI5 535 aa13.62□□□□□ -0.23
TNFRSF8-203ENST00000417814 LAMB2P55268 1798 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 SOWAHBA6NEL2 793 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 CCL22O00626 93 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 BUD23O43709 281 aaKnown RBP13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 MRPS22P82650 360 aaKnown RBP13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 DPY19L2Q6NUT2 758 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 C15orf39Q6ZRI6 1047 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 GSDMBQ8TAX9 411 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 PPWD1Q96BP3 646 aaKnown RBP13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 ERLEC1Q96DZ1 483 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 TIPINQ9BVW5 301 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 MRIQ9BWK5 157 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 PHACTR1Q9C0D0 580 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 EBF3Q9H4W6 596 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 TUBGCP4Q9UGJ1 667 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 AP4E1Q9UPM8 1137 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 PRPF4O43172 522 aaKnown RBP eCLIP13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 DDNO94850 711 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 ARL2P36404 184 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 MAPK10P53779 464 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 DEUP1Q05D60 604 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 PPM1LQ5SGD2 360 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 FAM83AQ86UY5 434 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 LRRC43Q8N309 656 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 PHTF2Q8N3S3 785 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 TEPSINQ96N21 525 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 CATSPER2Q96P56 530 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 TUBGCP5Q96RT8 1024 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 GMLQ99445 158 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 ST6GALNAC4Q9H4F1 302 aa13.61□□□□□ -0.23
TNFRSF8-203ENST00000417814 PIF1Q9H611 641 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms