RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 FAM204AQ9H8W3 233 aa8.41□□□□□ -1.06
MDC1-203ENST00000417033 MRPL47Q9HD33 250 aaKnown RBP8.41□□□□□ -1.06
MDC1-203ENST00000417033 WDR6Q9NNW5 1121 aaKnown RBP8.41□□□□□ -1.06
MDC1-203ENST00000417033 LUC7LQ9NQ29 371 aaKnown RBP8.41□□□□□ -1.06
MDC1-203ENST00000417033 GKN1Q9NS71 199 aa8.41□□□□□ -1.06
MDC1-203ENST00000417033 ABCC13Q9NSE7 274 aa8.41□□□□□ -1.06
MDC1-203ENST00000417033 PIGVQ9NUD9 493 aa8.41□□□□□ -1.06
MDC1-203ENST00000417033 GPATCH2LQ9NWQ4 482 aa8.41□□□□□ -1.06
MDC1-203ENST00000417033 DDIT4Q9NX09 232 aa8.41□□□□□ -1.06
MDC1-203ENST00000417033 CLIC5Q9NZA1 410 aa8.41□□□□□ -1.06
MDC1-203ENST00000417033 MARCH2Q9P0N8 246 aa8.41□□□□□ -1.06
MDC1-203ENST00000417033 DPP7Q9UHL4 492 aa8.41□□□□□ -1.06
MDC1-203ENST00000417033 XPO7Q9UIA9 1087 aaKnown RBP8.41□□□□□ -1.06
MDC1-203ENST00000417033 PACSIN2Q9UNF0 486 aaPredicted RBP8.41□□□□□ -1.06
MDC1-203ENST00000417033 CCL26Q9Y258 94 aa8.41□□□□□ -1.06
MDC1-203ENST00000417033 CPQQ9Y646 472 aa8.41□□□□□ -1.06
MDC1-203ENST00000417033 TK2O00142 265 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 MBTPS2O43462 519 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 NCK2O43639 380 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 LRCH4O75427 683 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 PROSCO94903 275 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 TNNT1P13805 278 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 COMTP21964 271 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 PTPN9P43378 593 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 TUBP50607 506 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 HADHBP55084 474 aaKnown RBP8.4□□□□□ -1.06
MDC1-203ENST00000417033 DEUP1Q05D60 604 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 ITIH3Q06033 890 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 EIF4EBP2Q13542 120 aaPredicted RBP8.4□□□□□ -1.06
MDC1-203ENST00000417033 CA9Q16790 459 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 SLC25A52Q3SY17 297 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 ATP13A4Q4VNC1 1196 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 ARHGAP29Q52LW3 1261 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 ZC3H12AQ5D1E8 599 aaKnown RBP8.4□□□□□ -1.06
MDC1-203ENST00000417033 ZNF662Q6ZS27 426 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 BEND5Q7L4P6 421 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 ARCQ7LC44 396 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 SLC35F6Q8N357 371 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 CCDC185Q8N715 623 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 MAFAQ8NHW3 353 aaPredicted RBP8.4□□□□□ -1.06
MDC1-203ENST00000417033 FNIP1Q8TF40 1166 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 CENPIQ92674 756 aaPredicted RBP8.4□□□□□ -1.06
MDC1-203ENST00000417033 FGF13Q92913 245 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 USP13Q92995 863 aaPredicted RBP8.4□□□□□ -1.06
MDC1-203ENST00000417033 FCRL2Q96LA5 508 aaPredicted RBP8.4□□□□□ -1.06
MDC1-203ENST00000417033 LRRC3BQ96PB8 259 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 CNPY3Q9BT09 278 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 KLF16Q9BXK1 252 aaPredicted RBP8.4□□□□□ -1.06
MDC1-203ENST00000417033 TSGA10Q9BZW7 698 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 SLITRK6Q9H5Y7 841 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 TASP1Q9H6P5 420 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 KLHL11Q9NVR0 708 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 EHD2Q9NZN4 543 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 PCSK1NQ9UHG2 260 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 RABGEF1Q9UJ41 708 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 STAP1Q9ULZ2 295 aa8.4□□□□□ -1.06
MDC1-203ENST00000417033 DENND4AQ7Z401 1863 aa8.4□□□□□ -1.07
MDC1-203ENST00000417033 CDH23Q9H251 3354 aa8.4□□□□□ -1.07
MDC1-203ENST00000417033 DOCK8Q8NF50 2099 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 DENND4CQ5VZ89 1909 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 TRAV19A0A0A6YYK7 116 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 MYO1FO00160 1098 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 ZNF197O14709 1029 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 ZSCAN12O43309 604 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 KRT86O43790 486 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 GREM1O60565 184 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 STC2O76061 302 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 MOCS2O96007 188 aaPredicted RBP8.39□□□□□ -1.07
MDC1-203ENST00000417033 IGLV3-27P01718 113 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 KLKB1P03952 638 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 CKMP06732 381 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 HDCP19113 662 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 FCARP24071 287 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 MIPP30301 263 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 RDXP35241 583 aaKnown RBP8.39□□□□□ -1.07
MDC1-203ENST00000417033 ATP5C1P36542 298 aaKnown RBP8.39□□□□□ -1.07
MDC1-203ENST00000417033 VIPR2P41587 438 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 PPP3CCP48454 512 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 DNA2P51530 1060 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 TBX4P57082 545 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 LSM11P83369 360 aaKnown RBP eCLIP8.39□□□□□ -1.07
MDC1-203ENST00000417033 SLC25A11Q02978 314 aaKnown RBP8.39□□□□□ -1.07
MDC1-203ENST00000417033 SMAD4Q13485 552 aaKnown RBP8.39□□□□□ -1.07
MDC1-203ENST00000417033 TRIP4Q15650 581 aaPredicted RBP8.39□□□□□ -1.07
MDC1-203ENST00000417033 SMTNL2Q2TAL5 461 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 ARHGAP15Q53QZ3 475 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 FAM78AQ5JUQ0 283 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 ATAT1Q5SQI0 421 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 CES5AQ6NT32 575 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 C11orf63Q6NUN7 778 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 CC2D1AQ6P1N0 951 aaPredicted RBP8.39□□□□□ -1.07
MDC1-203ENST00000417033 SCYL2Q6P3W7 929 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 CMTM8Q8IZV2 173 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 PYROXD2Q8N2H3 581 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 NIPA2Q8N8Q9 360 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 LEMD2Q8NC56 503 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.39□□□□□ -1.07
MDC1-203ENST00000417033 ZSCAN18Q8TBC5 510 aaPredicted RBP8.39□□□□□ -1.07
MDC1-203ENST00000417033 KRT35Q92764 455 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 MYEOVQ96EZ4 313 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms