RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 NFIBO00712 420 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 ASNSP08243 561 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 NUDT2P50583 147 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 RPL26P61254 145 aaKnown RBP15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 APOFQ13790 326 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 FASTKD1Q53R41 847 aaKnown RBP15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 FAXCQ5TGI0 409 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 OGFOD2Q6N063 350 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 DRICH1Q6PGQ1 229 aaPredicted RBP15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 LDHDQ86WU2 507 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 HSPH1Q92598 858 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 USP13Q92995 863 aaPredicted RBP15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 NKD2Q969F2 451 aaPredicted RBP15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 WNK4Q96J92 1243 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 COX4I2Q96KJ9 171 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 WRNIP1Q96S55 665 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 HAUS8Q9BT25 410 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 IP6K2Q9UHH9 426 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 CCPG1Q9ULG6 757 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 E2F8A0AVK6 867 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 SPTLC1O15269 473 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 BPGMP07738 259 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 GPC3P51654 580 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 TGFBIQ15582 683 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 PDCD4Q53EL6 469 aaKnown RBP15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 KRT80Q6KB66 452 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 C17orf50Q8WW18 174 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 ZNF778Q96MU6 729 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 SEMA6AQ9H2E6 1030 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 UNC45AQ9H3U1 944 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 ITGA11Q9UKX5 1188 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 ARHGAP26Q9UNA1 814 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 NFASCO94856 1347 aa15.17■□□□□ 0.02
NCKIPSD-204ENST00000416649 FOSP01100 380 aaPredicted RBP15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 GSTT2P0CG29 244 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 GSTT2BP0CG30 244 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 ARP10275 920 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 FGFR3P22607 806 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 NFKBIAP25963 317 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 RPL10P27635 214 aaKnown RBP15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 CDK9P50750 372 aaKnown RBP15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 MYBPC2Q14324 1141 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 ARMCX6Q7L4S7 300 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 THAP11Q96EK4 314 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 TEPSINQ96N21 525 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 EBF1Q9UH73 591 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 SSX2IPQ9Y2D8 614 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 PCDHB4Q9Y5E5 795 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 SCINQ9Y6U3 715 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 FUOMA2VDF0 154 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 SERPINB5P36952 375 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 EIF2B2P49770 351 aaKnown RBP15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 ADGRE1Q14246 886 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 LGSNQ5TDP6 509 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 C16orf87Q6PH81 154 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 ELMSAN1Q6PJG2 1045 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 PTAR1Q7Z6K3 402 aaPredicted RBP15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 EME1Q96AY2 570 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 PKP2Q99959 881 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 ZNF577Q9BSK1 485 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 NRDE2Q9H7Z3 1164 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 PARVAQ9NVD7 372 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 RBMX2Q9Y388 322 aaKnown RBP15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 CROCCQ5TZA2 2017 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 A0A0B4J269 797 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 ADAM23O75077 832 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 PSMD10O75832 226 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 CD1EP15812 388 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 GNA15P30679 374 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 CDKN2BP42772 138 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 SLC1A6P48664 564 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 TUBB3Q13509 450 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 BRDTQ58F21 947 aaPredicted RBP15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 TMEM110Q86TL2 294 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 LILRA2Q8N149 483 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 SLC35B2Q8TB61 432 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 VPS50Q96JG6 964 aa15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 PPP1R10Q96QC0 940 aaKnown RBP15.16■□□□□ 0.02
NCKIPSD-204ENST00000416649 IGLV3-22A0A075B6J6 115 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 RFPL1O75677 317 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 FBXO21O94952 628 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 P4HBP07237 508 aaKnown RBP15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 COX4I1P13073 169 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 NUP107P57740 925 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 NOMO3P69849 1222 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 IGBP1P78318 339 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 BORAQ6PGQ7 559 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 XKR5Q6UX68 686 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 DEPTORQ8TB45 409 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 CHURC1Q8WUH1 139 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 CDRT15Q96T59 188 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 STRA6Q9BX79 667 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 GGA3Q9NZ52 723 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 ZC3H7BQ9UGR2 993 aaKnown RBP15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 SORCS3Q9UPU3 1222 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 E7ESA3 106 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 MATN2O00339 956 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 PIK3R2O00459 728 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 SNNO75324 88 aaPredicted RBP15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 CSPG5O95196 566 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms