RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 C12orf76Q8N812 135 aaPredicted RBP8.73□□□□□ -1.01
RBM39-208ENST00000416108 KCTD6Q8NC69 237 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 EXD1Q8NHP7 514 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.73□□□□□ -1.01
RBM39-208ENST00000416108 KRT35Q92764 455 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 CD101Q93033 1021 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 NT5C3BQ969T7 300 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 NTAN1Q96AB6 310 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 RNF25Q96BH1 459 aaPredicted RBP8.73□□□□□ -1.01
RBM39-208ENST00000416108 PLD4Q96BZ4 506 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 CAPZA3Q96KX2 299 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 FAM161BQ96MY7 647 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 NAP1L3Q99457 506 aaPredicted RBP8.73□□□□□ -1.01
RBM39-208ENST00000416108 SNRNP25Q9BV90 132 aaKnown RBP8.73□□□□□ -1.01
RBM39-208ENST00000416108 MAK16Q9BXY0 300 aaKnown RBP8.73□□□□□ -1.01
RBM39-208ENST00000416108 LRRC3Q9BY71 257 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 TKTL2Q9H0I9 626 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 CARD9Q9H257 536 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 IL21Q9HBE4 155 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 PIGVQ9NUD9 493 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.73□□□□□ -1.01
RBM39-208ENST00000416108 KLHL11Q9NVR0 708 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 HCFC1R1Q9NWW0 138 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 CLDND1Q9NY35 253 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 DNMT3BQ9UBC3 853 aaKnown RBP8.73□□□□□ -1.01
RBM39-208ENST00000416108 LSM7Q9UK45 103 aaKnown RBP8.73□□□□□ -1.01
RBM39-208ENST00000416108 MTCH2Q9Y6C9 303 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 NUP205Q92621 2012 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 DOCK8Q8NF50 2099 aa8.73□□□□□ -1.01
RBM39-208ENST00000416108 C2orf78A6NCI8 922 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 SOBPA7XYQ1 873 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 H3BRJ5 948 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 CES2O00748 559 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 LINC01565O15544 149 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 DAPK3O43293 454 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 COCHO43405 550 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 OAS1P00973 400 aaKnown RBP8.72□□□□□ -1.01
RBM39-208ENST00000416108 IGLV3-25P01717 112 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 IRF1P10914 325 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 TCF4P15884 667 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 GJA1P17302 382 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 POU3F3P20264 500 aaPredicted RBP8.72□□□□□ -1.01
RBM39-208ENST00000416108 CXCR5P32302 372 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 AVPR1AP37288 418 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 MARCKSL1P49006 195 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 HARS2P49590 506 aaKnown RBP8.72□□□□□ -1.01
RBM39-208ENST00000416108 PGFP49763 221 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 ZNF135P52742 658 aaPredicted RBP8.72□□□□□ -1.01
RBM39-208ENST00000416108 COPS2P61201 443 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 NTHL1P78549 312 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 RBM10P98175 930 aaKnown RBP8.72□□□□□ -1.01
RBM39-208ENST00000416108 ITIH3Q06033 890 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 ZNF211Q13398 564 aaPredicted RBP8.72□□□□□ -1.01
RBM39-208ENST00000416108 ADAM15Q13444 863 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 KCNC3Q14003 757 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 TEAD2Q15562 447 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 WHAMMP3Q1A5X7 153 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 ZC3H12AQ5D1E8 599 aaKnown RBP8.72□□□□□ -1.01
RBM39-208ENST00000416108 PPP6R3Q5H9R7 873 aaPredicted RBP8.72□□□□□ -1.01
RBM39-208ENST00000416108 KCNT1Q5JUK3 1230 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 ATAT1Q5SQI0 421 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 TXNDC8Q6A555 127 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 GAREM2Q75VX8 874 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 BNIPLQ7Z465 357 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 GPR149Q86SP6 731 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 DDX42Q86XP3 938 aaKnown RBP eCLIP8.72□□□□□ -1.012e-6■□□□□ 9.8
RBM39-208ENST00000416108 ARFGAP1Q8N6T3 406 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 CCDC185Q8N715 623 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 ARL14EPQ8N8R7 260 aaPredicted RBP8.72□□□□□ -1.01
RBM39-208ENST00000416108 MAB21L3Q8N8X9 362 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 VN1R2Q8NFZ6 395 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 SHKBP1Q8TBC3 707 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 MAIP1Q8WWC4 291 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 ZNF707Q96C28 371 aaPredicted RBP8.72□□□□□ -1.01
RBM39-208ENST00000416108 ACSF2Q96CM8 615 aaPredicted RBP8.72□□□□□ -1.01
RBM39-208ENST00000416108 LRCH3Q96II8 777 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 RIPOR3Q96MK2 946 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 PEBP4Q96S96 227 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 EPAS1Q99814 870 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 DDX50Q9BQ39 737 aaKnown RBP8.72□□□□□ -1.01
RBM39-208ENST00000416108 APOL5Q9BWW9 433 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 CALN1Q9BXU9 219 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 DCLK3Q9C098 648 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 TASP1Q9H6P5 420 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 GPATCH2LQ9NWQ4 482 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 STIM2Q9P246 746 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 RNF14Q9UBS8 474 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 CDC23Q9UJX2 597 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 FZD10Q9ULW2 581 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 SH3BP1Q9Y3L3 701 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 CPQQ9Y646 472 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 MYOFQ9NZM1 2061 aa8.72□□□□□ -1.01
RBM39-208ENST00000416108 KIF26AQ9ULI4 1882 aaPredicted RBP8.71□□□□□ -1.01
RBM39-208ENST00000416108 GOLGA6L10A0A0M3HER8 536 aa8.71□□□□□ -1.02
RBM39-208ENST00000416108 TYW5A2RUC4 315 aaKnown RBP8.71□□□□□ -1.02
RBM39-208ENST00000416108 PI4K2BG5E9Z4 385 aa8.71□□□□□ -1.02
RBM39-208ENST00000416108 PGRMC1O00264 195 aaKnown RBP8.71□□□□□ -1.02
RBM39-208ENST00000416108 SOX1O00570 391 aaPredicted RBP8.71□□□□□ -1.02
RBM39-208ENST00000416108 CREB3O43889 395 aa8.71□□□□□ -1.02
RBM39-208ENST00000416108 SRGAP2O75044 1071 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms