RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 IFNAR2P48551 515 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 BPIFB4P59827 614 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 USP4Q13107 963 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 ASIC2Q16515 512 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 CRY1Q16526 586 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 ZNF394Q53GI3 561 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 CCDC186Q7Z3E2 898 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 IRF2BP2Q7Z5L9 587 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 THEM5Q8N1Q8 247 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 ALLCQ8N6M5 410 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 TWNKQ96RR1 684 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 PKMYT1Q99640 499 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 NT5C1AQ9BXI3 368 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 GTF3C4Q9UKN8 822 aa17.48■□□□□ 0.39
CDC42EP1-202ENST00000415670 PLXNB3Q9ULL4 1909 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 ATP2C2O75185 946 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 LMO2P25791 158 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 PCSK1P29120 753 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 TIE1P35590 1138 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 PRKCIP41743 596 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 ZNF268Q14587 947 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 MEA1Q16626 185 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 TSR1Q2NL82 804 aaKnown RBP17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 C12orf40Q86WS4 652 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 CRYBG2Q8N1P7 616 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 SLC4A11Q8NBS3 891 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 ACDQ96AP0 544 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 TMEM176AQ96HP8 235 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 ACBD6Q9BR61 282 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 DNAI2Q9GZS0 605 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 KIF9Q9HAQ2 790 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 CDH9Q9ULB4 789 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 MMP17Q9ULZ9 603 aa17.47■□□□□ 0.39
CDC42EP1-202ENST00000415670 KLF8O95600 359 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 CKMP06732 381 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 PDGFRBP09619 1106 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 FECHP22830 423 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 DDX6P26196 483 aaKnown RBP eCLIP17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 P2RY2P41231 377 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 AMPD2Q01433 879 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 ARID5AQ03989 594 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 PTK2Q05397 1052 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 SEMA3BQ13214 749 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 ORC1Q13415 861 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 WDR59Q6PJI9 974 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 TXNDC5Q8NBS9 432 aaKnown RBP17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 ATP2A3Q93084 1043 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 TNIP3Q96KP6 325 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 GTPBP2Q9BX10 602 aaKnown RBP17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 DPEP3Q9H4B8 488 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 ZNHIT6Q9NWK9 470 aaKnown RBP17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 KIAA1257Q9ULG3 409 aa17.46■□□□□ 0.39
CDC42EP1-202ENST00000415670 HELZP42694 1942 aaKnown RBP17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 TRAV19A0A0A6YYK7 116 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 MAP3K13O43283 966 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 ADAM23O75077 832 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 SERPING1P05155 500 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 USP17L7P0C7H9 530 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 CSH1P0DML2 217 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 CSH2P0DML3 217 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 VDRP11473 427 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 GNA15P30679 374 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 USP46P62068 366 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 CDK17Q00537 523 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 KLHL30Q0D2K2 578 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 MAP7D1Q3KQU3 841 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 HGSNATQ68CP4 663 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 ACOT1Q86TX2 421 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 SLC47A2Q86VL8 602 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 SCN4BQ8IWT1 228 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 DCP1BQ8IZD4 617 aaKnown RBP17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 PNPLA1Q8N8W4 532 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 IL17RCQ8NAC3 791 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 B3GALNT2Q8NCR0 500 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 EPS8L1Q8TE68 723 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 C2orf15Q8WU43 125 aaKnown RBP17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 BBC3Q96PG8 261 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 SYT15Q9BQS2 421 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 RNF38Q9H0F5 515 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 ACP6Q9NPH0 428 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 EVLQ9UI08 416 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 GPSM3Q9Y4H4 160 aa17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 BZW2Q9Y6E2 419 aaKnown RBP17.45■□□□□ 0.38
CDC42EP1-202ENST00000415670 CFIP05156 583 aa17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 PTMAP06454 111 aaKnown RBP17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 CYP11B1P15538 503 aa17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 PTPN1P18031 435 aaKnown RBP17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 HDCP19113 662 aa17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 PDE6CP51160 858 aa17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 COL28A1Q2UY09 1125 aa17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 INTS6LQ5JSJ4 861 aaKnown RBP17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 LPCAT2Q7L5N7 544 aa17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 NOP9Q86U38 636 aaKnown RBP17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 MARCH9Q86YJ5 346 aa17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 HMGB4Q8WW32 186 aa17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 MYRFLQ96LU7 910 aa17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 HEXIM2Q96MH2 286 aaKnown RBP17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 NUSAP1Q9BXS6 441 aaKnown RBP17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 NOCTQ9UK39 431 aaKnown RBP17.44■□□□□ 0.38
CDC42EP1-202ENST00000415670 PILRBQ9UKJ0 227 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms