RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 DAB1O75553 588 aa12□□□□□ -0.49
RFFL-205ENST00000415395 LCP1P13796 627 aa12□□□□□ -0.49
RFFL-205ENST00000415395 CCNB1P14635 433 aa12□□□□□ -0.49
RFFL-205ENST00000415395 MSH2P43246 934 aa12□□□□□ -0.49
RFFL-205ENST00000415395 MAP3K7CLP57077 242 aa12□□□□□ -0.49
RFFL-205ENST00000415395 MRPS5P82675 430 aaKnown RBP12□□□□□ -0.49
RFFL-205ENST00000415395 ADIGQ0VDE8 80 aa12□□□□□ -0.49
RFFL-205ENST00000415395 MRPL58Q14197 206 aaKnown RBP12□□□□□ -0.49
RFFL-205ENST00000415395 NFE2Q16621 373 aaPredicted RBP12□□□□□ -0.49
RFFL-205ENST00000415395 CCDC14Q49A88 953 aa12□□□□□ -0.49
RFFL-205ENST00000415395 TLDC1Q6P9B6 456 aa12□□□□□ -0.49
RFFL-205ENST00000415395 RGS9BPQ6ZS82 235 aa12□□□□□ -0.49
RFFL-205ENST00000415395 VSIG1Q86XK7 387 aa12□□□□□ -0.49
RFFL-205ENST00000415395 ARFGAP1Q8N6T3 406 aa12□□□□□ -0.49
RFFL-205ENST00000415395 MAB21L3Q8N8X9 362 aa12□□□□□ -0.49
RFFL-205ENST00000415395 OR10T2Q8NGX3 314 aa12□□□□□ -0.49
RFFL-205ENST00000415395 TEKT4Q8WW24 435 aa12□□□□□ -0.49
RFFL-205ENST00000415395 FUBP3Q96I24 572 aaKnown RBP eCLIP12□□□□□ -0.49
RFFL-205ENST00000415395 PIWIL1Q96J94 861 aaKnown RBP12□□□□□ -0.49
RFFL-205ENST00000415395 SLITRK1Q96PX8 696 aa12□□□□□ -0.49
RFFL-205ENST00000415395 TBCBQ99426 244 aa12□□□□□ -0.49
RFFL-205ENST00000415395 SMOQ99835 787 aa12□□□□□ -0.49
RFFL-205ENST00000415395 OSBPL8Q9BZF1 889 aa12□□□□□ -0.49
RFFL-205ENST00000415395 ZCWPW1Q9H0M4 648 aa12□□□□□ -0.49
RFFL-205ENST00000415395 DMAP1Q9NPF5 467 aaPredicted RBP12□□□□□ -0.49
RFFL-205ENST00000415395 USP18Q9UMW8 372 aa12□□□□□ -0.49
RFFL-205ENST00000415395 PRG3Q9Y2Y8 225 aaPredicted RBP12□□□□□ -0.49
RFFL-205ENST00000415395 USH1CQ9Y6N9 552 aa12□□□□□ -0.49
RFFL-205ENST00000415395 COL4A4P53420 1690 aaPredicted RBP12□□□□□ -0.49
RFFL-205ENST00000415395 EXOC1LA0A1B0GW35 172 aa12□□□□□ -0.49
RFFL-205ENST00000415395 RASA4BC9J798 803 aa12□□□□□ -0.49
RFFL-205ENST00000415395 E7ENQ6 273 aa12□□□□□ -0.49
RFFL-205ENST00000415395 PIK3R2O00459 728 aa12□□□□□ -0.49
RFFL-205ENST00000415395 PRPF4O43172 522 aaKnown RBP eCLIP12□□□□□ -0.49
RFFL-205ENST00000415395 RASA4O43374 803 aa12□□□□□ -0.49
RFFL-205ENST00000415395 DGKIO75912 1065 aa12□□□□□ -0.49
RFFL-205ENST00000415395 BEST1O76090 585 aa12□□□□□ -0.49
RFFL-205ENST00000415395 BAIAP3O94812 1187 aa12□□□□□ -0.49
RFFL-205ENST00000415395 TJP3O95049 919 aa12□□□□□ -0.49
RFFL-205ENST00000415395 KRT1P04264 644 aa12□□□□□ -0.49
RFFL-205ENST00000415395 GALTP07902 379 aa12□□□□□ -0.49
RFFL-205ENST00000415395 FGFR3P22607 806 aa12□□□□□ -0.49
RFFL-205ENST00000415395 MIPP30301 263 aa12□□□□□ -0.49
RFFL-205ENST00000415395 SLC11A1P49279 550 aa12□□□□□ -0.49
RFFL-205ENST00000415395 ADCY1Q08828 1119 aa12□□□□□ -0.49
RFFL-205ENST00000415395 SMARCB1Q12824 385 aa12□□□□□ -0.49
RFFL-205ENST00000415395 KLF1Q13351 362 aaPredicted RBP12□□□□□ -0.49
RFFL-205ENST00000415395 RASA2Q15283 850 aa12□□□□□ -0.49
RFFL-205ENST00000415395 PARP6Q2NL67 630 aa12□□□□□ -0.49
RFFL-205ENST00000415395 BOLA3Q53S33 107 aa12□□□□□ -0.49
RFFL-205ENST00000415395 TFDP3Q5H9I0 405 aa12□□□□□ -0.49
RFFL-205ENST00000415395 DAB2IPQ5VWQ8 1189 aa12□□□□□ -0.49
RFFL-205ENST00000415395 ZNF280DQ6N043 979 aa12□□□□□ -0.49
RFFL-205ENST00000415395 TRNP1Q6NT89 227 aa12□□□□□ -0.49
RFFL-205ENST00000415395 DRICH1Q6PGQ1 229 aaPredicted RBP12□□□□□ -0.49
RFFL-205ENST00000415395 STRADAQ7RTN6 431 aa12□□□□□ -0.49
RFFL-205ENST00000415395 PCGF5Q86SE9 256 aa12□□□□□ -0.49
RFFL-205ENST00000415395 SRRM1Q8IYB3 904 aaKnown RBP12□□□□□ -0.49
RFFL-205ENST00000415395 TMEM199Q8N511 208 aa12□□□□□ -0.49
RFFL-205ENST00000415395 ZMIZ2Q8NF64 920 aa12□□□□□ -0.49
RFFL-205ENST00000415395 GDAP1Q8TB36 358 aa12□□□□□ -0.49
RFFL-205ENST00000415395 IRGQQ8WZA9 623 aa12□□□□□ -0.49
RFFL-205ENST00000415395 CENPIQ92674 756 aaPredicted RBP12□□□□□ -0.49
RFFL-205ENST00000415395 INPP5DQ92835 1189 aa12□□□□□ -0.49
RFFL-205ENST00000415395 VWCEQ96DN2 955 aa12□□□□□ -0.49
RFFL-205ENST00000415395 SMC6Q96SB8 1091 aa12□□□□□ -0.49
RFFL-205ENST00000415395 C11orf84Q9BUA3 381 aaPredicted RBP12□□□□□ -0.49
RFFL-205ENST00000415395 TRIM62Q9BVG3 475 aa12□□□□□ -0.49
RFFL-205ENST00000415395 PHACTR1Q9C0D0 580 aa12□□□□□ -0.49
RFFL-205ENST00000415395 MARCH5Q9NX47 278 aa12□□□□□ -0.49
RFFL-205ENST00000415395 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12□□□□□ -0.49
RFFL-205ENST00000415395 RPL26L1Q9UNX3 145 aaKnown RBP12□□□□□ -0.49
RFFL-205ENST00000415395 NAALADL1Q9UQQ1 740 aa12□□□□□ -0.49
RFFL-205ENST00000415395 KIAA0100Q14667 2235 aaKnown RBP11.99□□□□□ -0.49
RFFL-205ENST00000415395 COL4A6Q14031 1691 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 HHLA1C9JL84 531 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 F8W810 466 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 PRPSAP2O60256 369 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 TRUB2O95900 331 aaKnown RBP11.99□□□□□ -0.49
RFFL-205ENST00000415395 AMHP03971 560 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 RALAP11233 206 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 TCF4P15884 667 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 PHBP35232 272 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 MATKP42679 507 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 MAGEA4P43358 317 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 TKTL1P51854 596 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 YWHAZP63104 245 aaKnown RBP11.99□□□□□ -0.49
RFFL-205ENST00000415395 TMED2Q15363 201 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 TAZQ16635 292 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 CCDC142Q17RM4 750 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 VARS2Q5ST30 1063 aaKnown RBP11.99□□□□□ -0.49
RFFL-205ENST00000415395 ZFYVE27Q5T4F4 411 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 FUT10Q6P4F1 479 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 SPOCD1Q6ZMY3 1216 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 ASRGL1Q7L266 308 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 SPATA2LQ8IUW3 424 aaPredicted RBP11.99□□□□□ -0.49
RFFL-205ENST00000415395 CMASQ8NFW8 434 aaPredicted RBP11.99□□□□□ -0.49
RFFL-205ENST00000415395 CFAP61Q8NHU2 1237 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 TOP1MTQ969P6 601 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 MIEF2Q96C03 454 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms