RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 SFTPA1Q8IWL2 248 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 ANKRD20A12PQ8NF67 263 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 ELMO3Q96BJ8 720 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 INTS2Q9H0H0 1204 aaKnown RBP17.53■□□□□ 0.4
SF1-207ENST00000413951 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.53■□□□□ 0.4
SF1-207ENST00000413951 HMGXB4Q9UGU5 601 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 CDX4O14627 284 aaPredicted RBP17.52■□□□□ 0.4
SF1-207ENST00000413951 CYP26A1O43174 497 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 TBX18O95935 607 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 CD58P19256 250 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 RDXP35241 583 aaKnown RBP17.52■□□□□ 0.4
SF1-207ENST00000413951 EXOC3L4Q17RC7 722 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 PEAR1Q5VY43 1037 aaPredicted RBP17.52■□□□□ 0.4
SF1-207ENST00000413951 DPY19L2P1Q6NXN4 242 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 TRIM65Q6PJ69 517 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 GBP6Q6ZN66 633 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 TPGS1Q6ZTW0 290 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 UCMAQ8WVF2 138 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 HEXIM2Q96MH2 286 aaKnown RBP17.52■□□□□ 0.4
SF1-207ENST00000413951 GABRG3Q99928 467 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 PILRBQ9UKJ0 227 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 STRIP2Q9ULQ0 834 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 SLC6A14Q9UN76 642 aa17.52■□□□□ 0.4
SF1-207ENST00000413951 A0A1W2PQH9 124 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 HHLA1C9JL84 531 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 GREM1O60565 184 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 CYBBP04839 570 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 GABRG2P18507 467 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 CDK11BP21127 795 aaKnown RBP17.51■□□□□ 0.39
SF1-207ENST00000413951 PON1P27169 355 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 PTGER3P43115 390 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 GCNT1Q02742 428 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 GFPT1Q06210 699 aaPredicted RBP17.51■□□□□ 0.39
SF1-207ENST00000413951 ZNF252P-AS1Q0IIN9 211 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 CUL2Q13617 745 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 STARD3Q14849 445 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 UAP1L1Q3KQV9 507 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 SMYD5Q6GMV2 418 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 ARMCX6Q7L4S7 300 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 HDDC3Q8N4P3 179 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 UBR7Q8N806 425 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 IPO4Q8TEX9 1081 aaKnown RBP17.51■□□□□ 0.39
SF1-207ENST00000413951 FOXJ1Q92949 421 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 TATDN2Q93075 761 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 JAKMIP2Q96AA8 810 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 NT5C1BQ96P26 610 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 TWNKQ96RR1 684 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 CRACR2AQ9BSW2 395 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 VPS16Q9H269 839 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 CALCOCO1Q9P1Z2 691 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 SUSD2Q9UGT4 822 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 MBD1Q9UIS9 605 aaPredicted RBP17.51■□□□□ 0.39
SF1-207ENST00000413951 USP3Q9Y6I4 520 aa17.51■□□□□ 0.39
SF1-207ENST00000413951 CNOT1A5YKK6 2376 aaKnown RBP17.5■□□□□ 0.39
SF1-207ENST00000413951 A0A1B0GTH6 734 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 ANTXRLA6NF34 631 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 PATE3B3GLJ2 98 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 GOLGA6L19H0YKK7 550 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 NDUFS2O75306 463 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 TPM2P07951 284 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 SYPP08247 313 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 ENGP17813 658 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 TBXAS1P24557 533 aaPredicted RBP17.5■□□□□ 0.39
SF1-207ENST00000413951 YWHAEP62258 255 aaKnown RBP17.5■□□□□ 0.39
SF1-207ENST00000413951 TPM4P67936 248 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 ZNF33AQ06730 810 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 KCNMA1Q12791 1236 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 HNRNPDQ14103 355 aaKnown RBP17.5■□□□□ 0.39
SF1-207ENST00000413951 SYCP2LQ5T4T6 812 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 GPRIN1Q7Z2K8 1008 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 TMEM176AQ96HP8 235 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 ARID3AQ99856 593 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 ANP32EQ9BTT0 268 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 SIX2Q9NPC8 291 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 OSER1Q9NX31 292 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 SLC27A6Q9Y2P4 619 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 CACNA1BQ00975 2339 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 EPG5Q9HCE0 2579 aa17.5■□□□□ 0.39
SF1-207ENST00000413951 A0A1W2PQF6 199 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 UPK3BL1B0FP48 263 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 UPK3BL2E5RIL1 263 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 CFIP05156 583 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 SERPINF2P08697 491 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 GNSP15586 552 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 SLC9A1P19634 815 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 PGFP49763 221 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 PPP1R26Q5T8A7 1209 aaPredicted RBP17.49■□□□□ 0.39
SF1-207ENST00000413951 EGFLAMQ63HQ2 1017 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 Q6ZNB5 142 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 RSRC2Q7L4I2 434 aaKnown RBP17.49■□□□□ 0.39
SF1-207ENST00000413951 MIB1Q86YT6 1006 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 WBP2Q969T9 261 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 ERGIC2Q96RQ1 377 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 NMUR1Q9HB89 426 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 ZDHHC4Q9NPG8 344 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 RTN4Q9NQC3 1192 aaKnown RBP17.49■□□□□ 0.39
SF1-207ENST00000413951 APEX2Q9UBZ4 518 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 FBXO10Q9UK96 956 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 SIK3Q9Y2K2 1263 aa17.49■□□□□ 0.39
SF1-207ENST00000413951 THADAQ6YHU6 1953 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms