RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 GOLGA6L22H0YM25 854 aa27.45■■□□□ 1.98
VEGFA-207ENST00000413642 HARS2P49590 506 aaKnown RBP27.45■■□□□ 1.98
VEGFA-207ENST00000413642 HSF5Q4G112 596 aaPredicted RBP27.45■■□□□ 1.98
VEGFA-207ENST00000413642 FAM217AQ8IXS0 508 aa27.45■■□□□ 1.98
VEGFA-207ENST00000413642 STK32AQ8WU08 396 aa27.45■■□□□ 1.98
VEGFA-207ENST00000413642 STARD13Q9Y3M8 1113 aa27.45■■□□□ 1.98
VEGFA-207ENST00000413642 NCAM1P13591 858 aa27.44■■□□□ 1.98
VEGFA-207ENST00000413642 CLCN1P35523 988 aa27.44■■□□□ 1.98
VEGFA-207ENST00000413642 NUDT18Q6ZVK8 323 aa27.44■■□□□ 1.98
VEGFA-207ENST00000413642 TMEM110Q86TL2 294 aa27.44■■□□□ 1.98
VEGFA-207ENST00000413642 SLC47A2Q86VL8 602 aa27.44■■□□□ 1.98
VEGFA-207ENST00000413642 DQX1Q8TE96 717 aaKnown RBP27.44■■□□□ 1.98
VEGFA-207ENST00000413642 DDI1Q8WTU0 396 aa27.44■■□□□ 1.98
VEGFA-207ENST00000413642 GOLGA1Q92805 767 aa27.44■■□□□ 1.98
VEGFA-207ENST00000413642 FAM149B1Q96BN6 582 aa27.44■■□□□ 1.98
VEGFA-207ENST00000413642 RMDN1Q96DB5 314 aa27.44■■□□□ 1.98
VEGFA-207ENST00000413642 FHOD1Q9Y613 1164 aa27.44■■□□□ 1.98
VEGFA-207ENST00000413642 GOLGA6L7A0A1B0GV03 622 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 TCRBV21S2A2A0A5A6 115 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 EEF1GP26641 437 aaKnown RBP27.43■■□□□ 1.98
VEGFA-207ENST00000413642 ACADSBP45954 432 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 PDCLQ13371 301 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 CCDC6Q16204 474 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 MEA1Q16626 185 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 GEN1Q17RS7 908 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 PLK5Q496M5 336 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 SYPL2Q5VXT5 272 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 ADAM32Q8TC27 787 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 KCNV2Q8TDN2 545 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 RLN3Q8WXF3 142 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 PIWIL1Q96J94 861 aaKnown RBP27.43■■□□□ 1.98
VEGFA-207ENST00000413642 LSM14BQ9BX40 385 aaKnown RBP27.43■■□□□ 1.98
VEGFA-207ENST00000413642 DUSP15Q9H1R2 295 aaPredicted RBP27.43■■□□□ 1.98
VEGFA-207ENST00000413642 FANCLQ9NW38 375 aa27.43■■□□□ 1.98
VEGFA-207ENST00000413642 GFRA2O00451 464 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 IGLV3-27P01718 113 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 CYBBP04839 570 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 SGSHP51688 502 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 TBX4P57082 545 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 PTK2Q05397 1052 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 RAPGEF1Q13905 1077 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 DRAP1Q14919 205 aaPredicted RBP27.42■■□□□ 1.98
VEGFA-207ENST00000413642 TAF5Q15542 800 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 KLHDC7AQ5VTJ3 777 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 CDKAL1Q5VV42 579 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 FRMD1Q8N878 549 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 HMGB4Q8WW32 186 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 VPS16Q9H269 839 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 ARRDC1-AS1Q9H2J1 176 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 POLMQ9NP87 494 aaPredicted RBP27.42■■□□□ 1.98
VEGFA-207ENST00000413642 PLCB1Q9NQ66 1216 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 STOML2Q9UJZ1 356 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 CFAP54Q96N23 3096 aa27.42■■□□□ 1.98
VEGFA-207ENST00000413642 WASH3PC4AMC7 463 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 HOXB2P14652 356 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 BCKDHBP21953 392 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 NTSR1P30989 418 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 ID4P47928 161 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 RFWD3Q6PCD5 774 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 SASS6Q6UVJ0 657 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 FAM71AQ8IYT1 594 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 CHPFQ8IZ52 775 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 ZC3H10Q96K80 434 aaKnown RBP27.41■■□□□ 1.98
VEGFA-207ENST00000413642 CPXM1Q96SM3 734 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 SEMA4GQ9NTN9 838 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 CACNA2D2Q9NY47 1150 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 BCCIPQ9P287 314 aaKnown RBP eCLIP27.41■■□□□ 1.98
VEGFA-207ENST00000413642 PCDHGC3Q9UN70 934 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 SLC27A6Q9Y2P4 619 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 RAD54BQ9Y620 910 aa27.41■■□□□ 1.98
VEGFA-207ENST00000413642 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.41■■□□□ 1.98
VEGFA-207ENST00000413642 A0A1W2PQF6 199 aa27.4■■□□□ 1.98
VEGFA-207ENST00000413642 FAM170AA1A519 330 aa27.4■■□□□ 1.98
VEGFA-207ENST00000413642 ALDH1A2O94788 518 aa27.4■■□□□ 1.98
VEGFA-207ENST00000413642 SLC6A4P31645 630 aa27.4■■□□□ 1.98
VEGFA-207ENST00000413642 KLK7P49862 253 aa27.4■■□□□ 1.98
VEGFA-207ENST00000413642 PITX1P78337 314 aaPredicted RBP27.4■■□□□ 1.98
VEGFA-207ENST00000413642 KRT31Q15323 416 aa27.4■■□□□ 1.98
VEGFA-207ENST00000413642 MPPE1Q53F39 396 aa27.4■■□□□ 1.98
VEGFA-207ENST00000413642 USP39Q53GS9 565 aaKnown RBP27.4■■□□□ 1.98
VEGFA-207ENST00000413642 ADGRF1Q5T601 910 aa27.4■■□□□ 1.98
VEGFA-207ENST00000413642 KIAA1211LQ6NV74 962 aa27.4■■□□□ 1.98
VEGFA-207ENST00000413642 TRMT11Q7Z4G4 463 aaKnown RBP27.4■■□□□ 1.98
VEGFA-207ENST00000413642 TAC4Q86UU9 113 aa27.4■■□□□ 1.98
VEGFA-207ENST00000413642 GPR161Q8N6U8 529 aaKnown RBP27.4■■□□□ 1.98
VEGFA-207ENST00000413642 C1orf131Q8NDD1 294 aaKnown RBP27.4■■□□□ 1.98
VEGFA-207ENST00000413642 OLIG1Q8TAK6 271 aa27.4■■□□□ 1.98
VEGFA-207ENST00000413642 FCRL2Q96LA5 508 aaPredicted RBP27.4■■□□□ 1.98
VEGFA-207ENST00000413642 SART1O43290 800 aaKnown RBP27.39■■□□□ 1.98
VEGFA-207ENST00000413642 HOXD9P28356 352 aaPredicted RBP27.39■■□□□ 1.98
VEGFA-207ENST00000413642 GBP1P32455 592 aa27.39■■□□□ 1.98
VEGFA-207ENST00000413642 NADSYN1Q6IA69 706 aa27.39■■□□□ 1.98
VEGFA-207ENST00000413642 PGBD3Q8N328 593 aa27.39■■□□□ 1.98
VEGFA-207ENST00000413642 TMA16Q96EY4 203 aaKnown RBP27.39■■□□□ 1.98
VEGFA-207ENST00000413642 PPP1R13BQ96KQ4 1090 aa27.39■■□□□ 1.98
VEGFA-207ENST00000413642 NAA15Q9BXJ9 866 aaKnown RBP27.39■■□□□ 1.98
VEGFA-207ENST00000413642 ZNF292O60281 2723 aa27.39■■□□□ 1.97
VEGFA-207ENST00000413642 ACSL4O60488 711 aa27.38■■□□□ 1.97
VEGFA-207ENST00000413642 EPN2O95208 641 aa27.38■■□□□ 1.97
VEGFA-207ENST00000413642 GABRG2P18507 467 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms