RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 C1orf131Q8NDD1 294 aaKnown RBP15.45■□□□□ 0.06
LIMS4-201ENST00000413601 ANKRD20A12PQ8NF67 263 aa15.45■□□□□ 0.06
LIMS4-201ENST00000413601 PPP1R13BQ96KQ4 1090 aa15.45■□□□□ 0.06
LIMS4-201ENST00000413601 CPXM1Q96SM3 734 aa15.45■□□□□ 0.06
LIMS4-201ENST00000413601 STK33Q9BYT3 514 aa15.45■□□□□ 0.06
LIMS4-201ENST00000413601 GANQ9H2C0 597 aa15.45■□□□□ 0.06
LIMS4-201ENST00000413601 MMP17Q9ULZ9 603 aa15.45■□□□□ 0.06
LIMS4-201ENST00000413601 SMG5Q9UPR3 1016 aaKnown RBP15.45■□□□□ 0.06
LIMS4-201ENST00000413601 DMDP11532 3685 aa15.45■□□□□ 0.06
LIMS4-201ENST00000413601 F8VZ95 297 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 SGK1O00141 431 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 TSPAN3O60637 253 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 PENKP01210 267 aaPredicted RBP15.44■□□□□ 0.06
LIMS4-201ENST00000413601 IGLV3-27P01718 113 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 CYBBP04839 570 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 CISD3P0C7P0 127 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 CYP11B1P15538 503 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 ZNF18P17022 549 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 TBX4P57082 545 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 SIM2Q14190 667 aaPredicted RBP15.44■□□□□ 0.06
LIMS4-201ENST00000413601 TAF5Q15542 800 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 TMEM92Q6UXU6 159 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 PRR23BQ6ZRT6 265 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 NUDT18Q6ZVK8 323 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 DCLK2Q8N568 766 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 ADAM32Q8TC27 787 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 DQX1Q8TE96 717 aaKnown RBP15.44■□□□□ 0.06
LIMS4-201ENST00000413601 DDI1Q8WTU0 396 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 PIWIL1Q96J94 861 aaKnown RBP15.44■□□□□ 0.06
LIMS4-201ENST00000413601 HINFPQ9BQA5 517 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 NAT10Q9H0A0 1025 aaKnown RBP15.44■□□□□ 0.06
LIMS4-201ENST00000413601 FAM207AQ9NSI2 230 aaPredicted RBP15.44■□□□□ 0.06
LIMS4-201ENST00000413601 FBXO10Q9UK96 956 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 HCN2Q9UL51 889 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 CEP192Q8TEP8 1941 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 THADAQ6YHU6 1953 aa15.44■□□□□ 0.06
LIMS4-201ENST00000413601 CCDC163A0A0D9SF12 145 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 PRRT4C9JH25 899 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 CAPN9O14815 690 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 EPHB6O15197 1021 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 ADAM23O75077 832 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 APBB3O95704 486 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 ATP1A3P13637 1013 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 HNRNPLP14866 589 aaKnown RBP eCLIP15.43■□□□□ 0.06
LIMS4-201ENST00000413601 CNR2P34972 360 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 POLR2FP61218 127 aaKnown RBP15.43■□□□□ 0.06
LIMS4-201ENST00000413601 YWHAZP63104 245 aaKnown RBP15.43■□□□□ 0.06
LIMS4-201ENST00000413601 UBXN1Q04323 297 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 RING1Q06587 406 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 SYCP1Q15431 976 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 CRY1Q16526 586 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 ADGRF1Q5T601 910 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 TAF3Q5VWG9 929 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 ZNF513Q8N8E2 541 aaPredicted RBP15.43■□□□□ 0.06
LIMS4-201ENST00000413601 TSTD1Q8NFU3 115 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 RUBCNQ92622 972 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 NOX5Q96PH1 765 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 TRIM62Q9BVG3 475 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 PDCL3Q9H2J4 239 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 POPDC2Q9HBU9 364 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 NLRC4Q9NPP4 1024 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 NCDNQ9UBB6 729 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 STOML2Q9UJZ1 356 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 RAB23Q9ULC3 237 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 CLEC4EQ9ULY5 219 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 SIK3Q9Y2K2 1263 aa15.43■□□□□ 0.06
LIMS4-201ENST00000413601 FAM186AA6NE01 2351 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 GOLGA6L7A0A1B0GV03 622 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 FAM170AA1A519 330 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 LRRC10BA6NIK2 292 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 LGALS16A8MUM7 142 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 AXIN1O15169 862 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 LATS1O95835 1130 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 ERBB2P04626 1255 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 DGKEP52429 567 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 HSF5Q4G112 596 aaPredicted RBP15.42■□□□□ 0.06
LIMS4-201ENST00000413601 PTPN20Q4JDL3 420 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 MPPE1Q53F39 396 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 EOGTQ5NDL2 527 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 EGFLAMQ63HQ2 1017 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 NUGGCQ68CJ6 796 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 OR6B2Q6IFH4 312 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 RFWD3Q6PCD5 774 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 FAM183BPQ6ZVS7 135 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 CEP68Q76N32 757 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 BEND5Q7L4P6 421 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 APTXQ7Z2E3 356 aaKnown RBP15.42■□□□□ 0.06
LIMS4-201ENST00000413601 NOP9Q86U38 636 aaKnown RBP15.42■□□□□ 0.06
LIMS4-201ENST00000413601 TAC4Q86UU9 113 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 UNC45BQ8IWX7 931 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 DHX40Q8IX18 779 aaKnown RBP15.42■□□□□ 0.06
LIMS4-201ENST00000413601 KCNV2Q8TDN2 545 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 GAB3Q8WWW8 586 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 DDX1Q92499 740 aaKnown RBP15.42■□□□□ 0.06
LIMS4-201ENST00000413601 FCRL2Q96LA5 508 aaPredicted RBP15.42■□□□□ 0.06
LIMS4-201ENST00000413601 PCMTD1Q96MG8 357 aaPredicted RBP15.42■□□□□ 0.06
LIMS4-201ENST00000413601 SERPINB11Q96P15 392 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 EBF1Q9UH73 591 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 TLR6Q9Y2C9 796 aa15.42■□□□□ 0.06
LIMS4-201ENST00000413601 STARD13Q9Y3M8 1113 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms