RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PCDHB9Q9Y5E1 797 aa12.78□□□□□ -0.36
LIMS2-210ENST00000413578 SLCO1B1Q9Y6L6 691 aa12.78□□□□□ -0.36
LIMS2-210ENST00000413578 MEI4A8MW99 385 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 MAPK13O15264 365 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 ACTN4O43707 911 aaKnown RBP12.77□□□□□ -0.37
LIMS2-210ENST00000413578 OXTRP30559 389 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 CHKAP35790 457 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 AFMP43652 599 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 MCCD1P59942 119 aaPredicted RBP12.77□□□□□ -0.37
LIMS2-210ENST00000413578 COG7P83436 770 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 ZNF234Q14588 700 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 EIF4HQ15056 248 aaKnown RBP12.77□□□□□ -0.37
LIMS2-210ENST00000413578 RAB41Q5JT25 222 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 PPP1R26Q5T8A7 1209 aaPredicted RBP12.77□□□□□ -0.37
LIMS2-210ENST00000413578 DCAF12L1Q5VU92 463 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 TMPRSS7Q7RTY8 843 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 ANKS1BQ7Z6G8 1248 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 TADA2BQ86TJ2 420 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 PDZD3Q86UT5 571 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 SIPA1Q96FS4 1042 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 CDK5RAP1Q96SZ6 601 aaKnown RBP12.77□□□□□ -0.37
LIMS2-210ENST00000413578 DUSP16Q9BY84 665 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 CCDC86Q9H6F5 360 aaKnown RBP12.77□□□□□ -0.37
LIMS2-210ENST00000413578 GAREM1Q9H706 876 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 PCDHGB2Q9Y5G2 931 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 CEP192Q8TEP8 1941 aa12.77□□□□□ -0.37
LIMS2-210ENST00000413578 BCAT2O15382 392 aaPredicted RBP12.76□□□□□ -0.37
LIMS2-210ENST00000413578 CLSTN1O94985 981 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 CER1O95813 267 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 SLFN14P0C7P3 912 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 PRKCHP24723 683 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 CORO1AP31146 461 aaKnown RBP12.76□□□□□ -0.37
LIMS2-210ENST00000413578 PIK3CAP42336 1068 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 PPP3CAQ08209 521 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 COL28A1Q2UY09 1125 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 HLA-BQ31612 363 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 KMT5BQ4FZB7 885 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 C19orf48Q6RUI8 117 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 IL27RAQ6UWB1 636 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 CPXM2Q8N436 756 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 MDM1Q8TC05 714 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 TAS1R2Q8TE23 839 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 UCMAQ8WVF2 138 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 PRCCQ92733 491 aaPredicted RBP12.76□□□□□ -0.37
LIMS2-210ENST00000413578 DCLK3Q9C098 648 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 NIF3L1Q9GZT8 377 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 PCED1AQ9H1Q7 454 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 TM7SF3Q9NS93 570 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 EIF2B4Q9UI10 523 aaKnown RBP12.76□□□□□ -0.37
LIMS2-210ENST00000413578 TRAF3IP3Q9Y228 551 aa12.76□□□□□ -0.37
LIMS2-210ENST00000413578 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.75□□□□□ -0.37
LIMS2-210ENST00000413578 K7ELQ4 463 aaPredicted RBP12.75□□□□□ -0.37
LIMS2-210ENST00000413578 FLRT2O43155 660 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 SYNCRIPO60506 623 aaKnown RBP12.75□□□□□ -0.37
LIMS2-210ENST00000413578 RALAP11233 206 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 MATKP42679 507 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 VAMP7P51809 220 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 ENPEPQ07075 957 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 EFEMP1Q12805 493 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 CAMK2BQ13554 666 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 CAMK2GQ13555 558 aaPredicted RBP12.75□□□□□ -0.37
LIMS2-210ENST00000413578 BHLHA9Q7RTU4 235 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 KNL1Q8NG31 2342 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 SORCS1Q8WY21 1168 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 PAGE5Q96GU1 130 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 NUP58Q9BVL2 599 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 SLC2A11Q9BYW1 496 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 UBXN6Q9BZV1 441 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 MIR1-1HGQ9H1L0 117 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 OSGEPQ9NPF4 335 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 EXOC1Q9NV70 894 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 FAM13BQ9NYF5 915 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 SERTAD1Q9UHV2 236 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 RASAL2Q9UJF2 1139 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 STOML2Q9UJZ1 356 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 PLXNB3Q9ULL4 1909 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 RAXQ9Y2V3 346 aa12.75□□□□□ -0.37
LIMS2-210ENST00000413578 A0A1B0GVT2 93 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 ATXN1LP0C7T5 689 aaKnown RBP12.74□□□□□ -0.37
LIMS2-210ENST00000413578 TRIM49P0CI25 452 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 TRIM49CP0CI26 452 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 TRIM21P19474 475 aaKnown RBP12.74□□□□□ -0.37
LIMS2-210ENST00000413578 HOXD9P28356 352 aaPredicted RBP12.74□□□□□ -0.37
LIMS2-210ENST00000413578 GCLMP48507 274 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 E2F5Q15329 346 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 TRIP4Q15650 581 aaPredicted RBP12.74□□□□□ -0.37
LIMS2-210ENST00000413578 NFIL3Q16649 462 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 KIF19Q2TAC6 998 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 PM20D1Q6GTS8 502 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 DENND1CQ8IV53 801 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 OR2T3Q8NH03 318 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 SETD7Q8WTS6 366 aaKnown RBP12.74□□□□□ -0.37
LIMS2-210ENST00000413578 FAXDC2Q96IV6 333 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 ORAI3Q9BRQ5 295 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 TMEM245Q9H330 911 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 C6orf106Q9H6K1 298 aaPredicted RBP12.74□□□□□ -0.37
LIMS2-210ENST00000413578 SCUBE2Q9NQ36 999 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 MARCH2Q9P0N8 246 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 BTBD3Q9Y2F9 522 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms