RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 SNX16P57768 344 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 APBA1Q02410 837 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 RING1Q06587 406 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 PDCLQ13371 301 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 NNTQ13423 1086 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 USP39Q53GS9 565 aaKnown RBP16.37■□□□□ 0.21
MCF2L-211ENST00000413354 FYB2Q5VWT5 728 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 SDE2Q6IQ49 451 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 ANO7Q6IWH7 933 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 RASSF3Q86WH2 238 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 ANKRD20A12PQ8NF67 263 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 CLEC4CQ8WTT0 213 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 IRX2Q9BZI1 471 aaPredicted RBP16.37■□□□□ 0.21
MCF2L-211ENST00000413354 PLK2Q9NYY3 685 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 STOML2Q9UJZ1 356 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 FBXO10Q9UK96 956 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 USP18Q9UMW8 372 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 PCDHGC3Q9UN70 934 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 E5RJQ4 531 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 CAPN9O14815 690 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 ZBTB24O43167 697 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-211ENST00000413354 MSI1O43347 362 aaKnown RBP16.36■□□□□ 0.21
MCF2L-211ENST00000413354 FOXD2O60548 495 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-211ENST00000413354 IGLV3-27P01718 113 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 NTSR1P30989 418 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 KRT9P35527 623 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 SLC11A2P49281 568 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 LMNB2Q03252 620 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 RAPGEF1Q13905 1077 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 ELF2Q15723 593 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 MPPE1Q53F39 396 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 ADGRF1Q5T601 910 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 EMC10Q5UCC4 262 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 TMEM92Q6UXU6 159 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 TMEM110Q86TL2 294 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 SCUBE3Q8IX30 993 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 FAM160A2Q8N612 972 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-211ENST00000413354 DDI1Q8WTU0 396 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 UCMAQ8WVF2 138 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 SLC2A11Q9BYW1 496 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 LHX5Q9H2C1 402 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 ACP6Q9NPH0 428 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 TAB2Q9NYJ8 693 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 BCCIPQ9P287 314 aaKnown RBP eCLIP16.36■□□□□ 0.21
MCF2L-211ENST00000413354 NUP205Q92621 2012 aa16.36■□□□□ 0.21
MCF2L-211ENST00000413354 CEP250Q9BV73 2442 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 NPC1O15118 1278 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 TRIM24O15164 1050 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 ADAM23O75077 832 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 RHOBTB1O94844 696 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 CISD3P0C7P0 127 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 HOXB2P14652 356 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 TBX4P57082 545 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 FKBP15Q5T1M5 1219 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 KLHDC7AQ5VTJ3 777 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 CDKAL1Q5VV42 579 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 TOGARAM2Q6ZUX3 1019 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 ANKS1BQ7Z6G8 1248 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 FAM71AQ8IYT1 594 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 CHPFQ8IZ52 775 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 ZNF557Q8N988 423 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-211ENST00000413354 MDGA1Q8NFP4 955 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 DQX1Q8TE96 717 aaKnown RBP16.35■□□□□ 0.21
MCF2L-211ENST00000413354 AZIN2Q96A70 460 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 ZC3H10Q96K80 434 aaKnown RBP16.35■□□□□ 0.21
MCF2L-211ENST00000413354 SPACA7Q96KW9 195 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 DDX50Q9BQ39 737 aaKnown RBP16.35■□□□□ 0.21
MCF2L-211ENST00000413354 LSM14BQ9BX40 385 aaKnown RBP16.35■□□□□ 0.21
MCF2L-211ENST00000413354 POPDC2Q9HBU9 364 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 AJAP1Q9UKB5 411 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-211ENST00000413354 DAAM1Q9Y4D1 1078 aa16.35■□□□□ 0.21
MCF2L-211ENST00000413354 ABCA7Q8IZY2 2146 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 TCRBV21S2A2A0A5A6 115 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 TYW5A2RUC4 315 aaKnown RBP16.34■□□□□ 0.21
MCF2L-211ENST00000413354 ANTXRLA6NF34 631 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 PRR5-ARHGAP8B1AHC4 643 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 PRRT4C9JH25 899 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 FOXN3O00409 490 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-211ENST00000413354 GFRA2O00451 464 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 IRAK2O43187 625 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 PAPSS1O43252 624 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-211ENST00000413354 EPN2O95208 641 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 GLI1P08151 1106 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 HNRNPLP14866 589 aaKnown RBP eCLIP16.34■□□□□ 0.21
MCF2L-211ENST00000413354 SDHBP21912 280 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 ARHGAP8P85298 464 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 MYL5Q02045 173 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 BYSLQ13895 437 aaKnown RBP16.34■□□□□ 0.21
MCF2L-211ENST00000413354 DRAP1Q14919 205 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-211ENST00000413354 EIF4HQ15056 248 aaKnown RBP16.34■□□□□ 0.21
MCF2L-211ENST00000413354 EGFLAMQ63HQ2 1017 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 KBTBD6Q86V97 674 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 IPO4Q8TEX9 1081 aaKnown RBP16.34■□□□□ 0.21
MCF2L-211ENST00000413354 PPP1R13BQ96KQ4 1090 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 TPSD1Q9BZJ3 242 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 PLCB1Q9NQ66 1216 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 ASNSD1Q9NWL6 643 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 CYTH4Q9UIA0 394 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 TLR6Q9Y2C9 796 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 PCDHGA5Q9Y5G8 931 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms