RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ATXN3LQ9H3M9 355 aa10.09□□□□□ -0.79
SMPD4-203ENST00000412570 PCDH18Q9HCL0 1135 aa10.09□□□□□ -0.79
SMPD4-203ENST00000412570 OR12D3Q9UGF7 316 aa10.09□□□□□ -0.79
SMPD4-203ENST00000412570 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.09□□□□□ -0.79
SMPD4-203ENST00000412570 AVILO75366 819 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 TJP3O95049 919 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 STAU1O95793 577 aaKnown RBP10.08□□□□□ -0.8
SMPD4-203ENST00000412570 RBL1P28749 1068 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 CDH5P33151 784 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-203ENST00000412570 CDKN2BP42772 138 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 SLC1A1P43005 524 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 RPL21P46778 160 aaKnown RBP10.08□□□□□ -0.8
SMPD4-203ENST00000412570 BYSLQ13895 437 aaKnown RBP10.08□□□□□ -0.8
SMPD4-203ENST00000412570 DPYSL3Q14195 570 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 NFE2Q16621 373 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-203ENST00000412570 ERMARDQ5T6L9 678 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 DENND1CQ8IV53 801 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 NDFIP2Q9NV92 336 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 hCG_1818297A0A087WSY0 165 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 BTNL10A8MVZ5 291 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 KRT14P02533 472 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 ACADSBP45954 432 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 CRADDP78560 199 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 ENPEPQ07075 957 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 PPIGQ13427 754 aaKnown RBP eCLIP10.08□□□□□ -0.88e-7■■■□□ 15.7
SMPD4-203ENST00000412570 ARHGAP36Q6ZRI8 547 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 SLC26A9Q7LBE3 791 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 C14orf80Q86SX3 495 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 HSFY1Q96LI6 401 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 ZDHHC4Q9NPG8 344 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 TBK1Q9UHD2 729 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 SQORQ9Y6N5 450 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 ATG2BQ96BY7 2078 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 VNN2O95498 520 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 EPCAMP16422 314 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 GABRR2P28476 465 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 SNX16P57768 344 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 UAP1Q16222 522 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-203ENST00000412570 FAM171BQ6P995 826 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 ACTRT1Q8TDG2 376 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 RBM41Q96IZ5 413 aaKnown RBP10.08□□□□□ -0.8
SMPD4-203ENST00000412570 ZCWPW1Q9H0M4 648 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 MARCH2Q9P0N8 246 aa10.08□□□□□ -0.8
SMPD4-203ENST00000412570 HHLA1C9JL84 531 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 NRG2O14511 850 aaPredicted RBP10.07□□□□□ -0.8
SMPD4-203ENST00000412570 PHF2O75151 1096 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 NOS2P35228 1153 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 CALCOCO2Q13137 446 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 CHSY1Q86X52 802 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 IFT20Q8IY31 132 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 RCOR2Q8IZ40 523 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 TSEN2Q8NCE0 465 aaKnown RBP10.07□□□□□ -0.8
SMPD4-203ENST00000412570 WBP2Q969T9 261 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 PABPC5Q96DU9 382 aaKnown RBP10.07□□□□□ -0.8
SMPD4-203ENST00000412570 EXOC2Q96KP1 924 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 RPRD1AQ96P16 312 aaPredicted RBP10.07□□□□□ -0.8
SMPD4-203ENST00000412570 TRAIPQ9BWF2 469 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 DCLK3Q9C098 648 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 PIDD1Q9HB75 910 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 IL1RAPL1Q9NZN1 696 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 ATP8B3O60423 1300 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 MCF2LO15068 1137 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 TGM5O43548 720 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 MFSD11O43934 449 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 PAGE1O75459 146 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 ERLIN1O75477 346 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 MBL2P11226 248 aaPredicted RBP10.07□□□□□ -0.8
SMPD4-203ENST00000412570 AARSP49588 968 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMPD4-203ENST00000412570 SLC25A52Q3SY17 297 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 ANKRD20A8PQ5CZ79 823 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 TNS4Q8IZW8 715 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 SLC39A11Q8N1S5 342 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 EXD1Q8NHP7 514 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 FCRL2Q96LA5 508 aaPredicted RBP10.07□□□□□ -0.8
SMPD4-203ENST00000412570 NAP1L3Q99457 506 aaPredicted RBP10.07□□□□□ -0.8
SMPD4-203ENST00000412570 LRRC4CQ9HCJ2 640 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 MYO15AQ9UKN7 3530 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 SLC38A8A6NNN8 435 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 APOL1O14791 398 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 KIAA0355O15063 1070 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 PSTPIP1O43586 416 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 CNTN5O94779 1100 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 OAZ2O95190 189 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 C8AP07357 584 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 ATF2P15336 505 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 FGFR3P22607 806 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 IGFBP4P22692 258 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 RDXP35241 583 aaKnown RBP10.07□□□□□ -0.8
SMPD4-203ENST00000412570 CHKAP35790 457 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 MAXP61244 160 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 SLC10A2Q12908 348 aaPredicted RBP10.07□□□□□ -0.8
SMPD4-203ENST00000412570 MAPRE1Q15691 268 aaKnown RBP10.07□□□□□ -0.8
SMPD4-203ENST00000412570 CASC4Q6P4E1 433 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 MAP7D3Q8IWC1 876 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 KLHL5Q96PQ7 755 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 YIPF1Q9Y548 306 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 INSL6Q9Y581 213 aa10.07□□□□□ -0.8
SMPD4-203ENST00000412570 LRG1P02750 347 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 APRTP07741 180 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 ERCC2P18074 760 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms