RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SIK3Q9Y2K2 1263 aa19.65■□□□□ 0.74
TRIM56-202ENST00000412507 ABCA7Q8IZY2 2146 aa19.64■□□□□ 0.74
TRIM56-202ENST00000412507 GPR179Q6PRD1 2367 aa19.64■□□□□ 0.74
TRIM56-202ENST00000412507 GVINP1Q7Z2Y8 2422 aa19.64■□□□□ 0.74
TRIM56-202ENST00000412507 LRRC10BA6NIK2 292 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 LGALS16A8MUM7 142 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 F8VZ95 297 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 CAPN9O14815 690 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 EPHB6O15197 1021 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 PENKP01210 267 aaPredicted RBP19.64■□□□□ 0.73
TRIM56-202ENST00000412507 CISD3P0C7P0 127 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 CHRM1P11229 460 aaPredicted RBP19.64■□□□□ 0.73
TRIM56-202ENST00000412507 ATP1A3P13637 1013 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 CYP11B1P15538 503 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 KIR2DL1P43626 348 aaPredicted RBP19.64■□□□□ 0.73
TRIM56-202ENST00000412507 TBX4P57082 545 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 UBXN1Q04323 297 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 SRSF5Q13243 272 aaKnown RBP19.64■□□□□ 0.73
TRIM56-202ENST00000412507 SYCP1Q15431 976 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 TAF5Q15542 800 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 KLHL40Q2TBA0 621 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 C10orf76Q5T2E6 689 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 TAF3Q5VWG9 929 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 FYB2Q5VWT5 728 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 SYPL2Q5VXT5 272 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 TOGARAM2Q6ZUX3 1019 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 APTXQ7Z2E3 356 aaKnown RBP19.64■□□□□ 0.73
TRIM56-202ENST00000412507 WDR5BQ86VZ2 330 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 DHX40Q8IX18 779 aaKnown RBP19.64■□□□□ 0.73
TRIM56-202ENST00000412507 FAM217AQ8IXS0 508 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 CPXM2Q8N436 756 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 ALLCQ8N6M5 410 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 ADAM32Q8TC27 787 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 PCMTD1Q96MG8 357 aaPredicted RBP19.64■□□□□ 0.73
TRIM56-202ENST00000412507 NOX5Q96PH1 765 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 BPIFA3Q9BQP9 254 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 EPC1Q9H2F5 836 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 PDCL3Q9H2J4 239 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 NLRC4Q9NPP4 1024 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 MMP17Q9ULZ9 603 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 PLXND1Q9Y4D7 1925 aa19.64■□□□□ 0.73
TRIM56-202ENST00000412507 NUP205Q92621 2012 aa19.63■□□□□ 0.73
TRIM56-202ENST00000412507 HRO43593 1189 aa19.63■□□□□ 0.73
TRIM56-202ENST00000412507 TSPAN3O60637 253 aa19.63■□□□□ 0.73
TRIM56-202ENST00000412507 KLF8O95600 359 aaPredicted RBP19.63■□□□□ 0.73
TRIM56-202ENST00000412507 IGLV3-27P01718 113 aa19.63■□□□□ 0.73
TRIM56-202ENST00000412507 DGKGP49619 791 aa19.63■□□□□ 0.73
TRIM56-202ENST00000412507 YWHAZP63104 245 aaKnown RBP19.63■□□□□ 0.73
TRIM56-202ENST00000412507 NUDT18Q6ZVK8 323 aa19.63■□□□□ 0.73
TRIM56-202ENST00000412507 NOP9Q86U38 636 aaKnown RBP19.63■□□□□ 0.73
TRIM56-202ENST00000412507 CAMKK1Q8N5S9 505 aa19.63■□□□□ 0.73
TRIM56-202ENST00000412507 IL17RCQ8NAC3 791 aa19.63■□□□□ 0.73
TRIM56-202ENST00000412507 TXNDC5Q8NBS9 432 aaKnown RBP19.63■□□□□ 0.73
TRIM56-202ENST00000412507 FUCA2Q9BTY2 467 aa19.63■□□□□ 0.73
TRIM56-202ENST00000412507 POPDC2Q9HBU9 364 aa19.63■□□□□ 0.73
TRIM56-202ENST00000412507 FBXO10Q9UK96 956 aa19.63■□□□□ 0.73
TRIM56-202ENST00000412507 CEP83Q9Y592 693 aa19.63■□□□□ 0.73
TRIM56-202ENST00000412507 FAM170AA1A519 330 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 SYCE3A1L190 88 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 SMTNL1A8MU46 457 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 SGK1O00141 431 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 GFPT2O94808 682 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 ERBB2P04626 1255 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 CYBBP04839 570 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 PTPN20Q4JDL3 420 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 OR6B2Q6IFH4 312 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 FAM183BPQ6ZVS7 135 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 BEND5Q7L4P6 421 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 TAC4Q86UU9 113 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 UNC45BQ8IWX7 931 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 ZNF513Q8N8E2 541 aaPredicted RBP19.62■□□□□ 0.73
TRIM56-202ENST00000412507 NEK11Q8NG66 645 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 DDI1Q8WTU0 396 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 DDX1Q92499 740 aaKnown RBP19.62■□□□□ 0.73
TRIM56-202ENST00000412507 FCRL2Q96LA5 508 aaPredicted RBP19.62■□□□□ 0.73
TRIM56-202ENST00000412507 SERPINB11Q96P15 392 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 TRIM62Q9BVG3 475 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 STOML2Q9UJZ1 356 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 HCN2Q9UL51 889 aa19.62■□□□□ 0.73
TRIM56-202ENST00000412507 SMG5Q9UPR3 1016 aaKnown RBP19.62■□□□□ 0.73
TRIM56-202ENST00000412507 CKAP5Q14008 2032 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 PRRT4C9JH25 899 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 GRAP2O75791 330 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 LATS1O95835 1130 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 HNRNPLP14866 589 aaKnown RBP eCLIP19.61■□□□□ 0.73
TRIM56-202ENST00000412507 ZNF165P49910 485 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 JAM2P57087 298 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 RING1Q06587 406 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 LPAL2Q16609 132 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 ADGRF1Q5T601 910 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 NUGGCQ68CJ6 796 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 TMEM92Q6UXU6 159 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 PRR23BQ6ZRT6 265 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 DEFB106AQ8N104 65 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 TMEM35BQ8NCS4 154 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 TSTD1Q8NFU3 115 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 SPAG5Q96R06 1193 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 ERGIC2Q96RQ1 377 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 SYNCQ9H7C4 482 aa19.61■□□□□ 0.73
TRIM56-202ENST00000412507 CLEC4EQ9ULY5 219 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms